Shewanella oncorhynchi: RA178_18470
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Entry
RA178_18470 CDS
T09381
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
sog
Shewanella oncorhynchi
Pathway
sog02020
Two-component system
sog02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_18470
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RA178_18470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sog02035
]
RA178_18470
Bacterial motility proteins [BR:
sog02035
]
Flagellar system
Chemotaxis proteins
MCPs
RA178_18470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
dCache_1
BLOC1_2
LOR
Tropomyosin
Fib_alpha
DUF1664
AI-2E_transport
Motif
Other DBs
NCBI-ProteinID:
WMB72382
UniProt:
A0AA50Q502
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All DBs
Position
4161510..4163174
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AA seq
554 aa
AA seq
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MSNFSLRNKLLLLSLFPLIFTLFVLMTVSYYVEKDALADEVTTFRTKLIGERKTQIKEAT
EIAAGIVQYQLSLKENGNVNQALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDM
TDPRGTKIIVGLLDAAKKGDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWMLGTGVYIDD
IDTVVEDYRATVTEQMIEKSYAILLIALLLAAITTVVILITAQRMVAPIKNMANNLNDIA
KGEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVM
SSQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEI
SALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFA
VVADEVRNLASRTQSSTLEINEMLTELHKLVALAVKTMEESQQSCVRSVDSSRAISESLG
SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQ
EGINLGKLVGQFKI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttcagcctacgtaataaattactgctgttgtcgttattccctttaattttt
actttgttcgtactcatgacagtttcttactatgtcgaaaaagacgcccttgctgatgaa
gtgacgacctttagaactaagctcatcggtgaacgtaaaacacaaataaaagaagccact
gaaattgccgcaggaatagtgcagtatcagttgtctttaaaagaaaatggcaatgtaaac
caagcactccgtgatatccgttttggcagttctggttacttctttatttacgactcccaa
ggtaaaaacctgttccatgccgtcatgcccaacctcgaagggcaaaataaaattgatatg
acagatccccgcggcactaaaatcattgtcggtttactcgatgccgctaaaaaaggggac
ggtaacttctcgttctactttcaaaaacccaataccaatgagcaaattgaaaaaatcggt
tactccatgatgatccctggcactgactggatgctaggcacgggagtctatatcgatgat
atcgacactgtcgttgaggattatcgtgcgacggtcactgagcagatgatcgaaaaatcc
tatgccattctgttaattgcgctgttactcgccgcgattactaccgttgttattctgatc
accgcccaacgtatggtcgcaccaattaaaaatatggcgaataacttaaacgatatcgct
aaaggtgaaggcgatttaaccaaacgtcttattgtgaaaggtgaagatgaaattgcacaa
ctaggccaatcctttaacctgtttgtcgataaactccaaaccatcataggcgatgtggca
aacgcgacggctaaagttaaaaccgccgccaacgcgattcacgatcaaaccaaagtcatg
tcgagccaactcatcagccataacaatgaaactgatcaagtggttaccgccatcactgaa
atgtcagccaccgccagcgaagtagcgcaaaataccacgcaagtggctgaagcgactcac
gccgccactggcgatgtagccaatgcccagcgctgcgtcgatgcttctttagaagaaatt
tcggcactcatggcgcaaatcaacaatgcggcgggcagtattcaatccttgagcgaacag
tctaaaaaaatcaacaacgtgctatcagtgattggcggtattgctgagcaaactaaccta
ttagcattaaatgccgccatcgaagcggcccgcgccggagaacagggccgaggctttgcc
gtggtggccgatgaagtgcgtaacttagcgagcagaacgcaatcaagcactttggaaatc
aatgagatgctaactgaactgcacaagcttgtcgcactggcagtaaaaacgatggaagaa
agtcagcaaagctgcgtgcgctcggtagactcttcccgtgcaatttctgaaagcctaggc
tcagtgacatcggcggtcacggcaattaacgacatgagcacccaaattgcgacggcggcc
acggaacaaagctctgtaaccgaagaaatcaaccgtaatgtgttcgccatccaagagata
gtgaatgagttactccattccagcgaagatgctgccagagtcagccagaccgtgtcacag
gaaggtattaacttaggtaagctcgtcggtcagtttaagatttaa
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