Shewanella oncorhynchi: RA178_18505
Help
Entry
RA178_18505 CDS
T09381
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_18505 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_18505 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_18505 (thrS)
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
RA178_18505 (thrS)
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RA178_18505 (thrS)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_18505 (thrS)
Prokaryotic type
RA178_18505 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
WMB72389
UniProt:
A0AA50KBZ9
LinkDB
All DBs
Position
complement(4167259..4168455)
Genome browser
AA seq
398 aa
AA seq
DB search
MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMK
KELWQTSGHMDMFAENMFFGGGKENMDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEF
GLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYHNLDV
KISTKPEKALGSDEQWCRAQKLLDSACQIEGFDAEYQAGEGAFYGPKIELSLTDSMGRRW
QCGTIQFDFNLPERFDVHYTNEQGEFERPVIMHQAMYGSIERWLGILLEVSQGNLPDWLH
PVPVAIASVNESNSQFVRQLAALCLARDMRVLIDISQNSVARKMKRFHKQKVPYILTVGD
KEEAENRVSVKCRKDGVMTHIPLFELADYLADKLECKL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacatcgcgaaattgcagaacaacttgacctatttcactctgaaccacaggcg
ccgggtatgattttttggcacccgaatggctgggcgttattccgagacattcaagagcac
atgaggcgcgtgtatcgccgaaatggttttgaggaagtgaacacgcctgtttttatgaag
aaggagttatggcaaacgtctgggcatatggacatgtttgcagagaacatgtttttcggt
ggcggaaaggaaaacatggatgaatatgtgttaaaacctatgtcttgtcctgcccatatt
ttgctgtttaagcgcggggtacatagccatagagatttgccactgcgactatttgagttt
ggcttagtgcaccgtaatgaatcctcaggctcgttaaatggttgcctgcgcgcacgccag
ttcactcaggatgatgcccatgttttttgctgttggtctcaggcagaggaggagatacgt
ggttttctccagcgtgcaaagcaggtttatggtgattacggctaccataatttagacgta
aaaatatcgactaaacctgagaaggcattaggcagcgatgaacaatggtgccgagcacaa
aagctactggattcagcctgtcagattgagggctttgatgccgagtatcaagctggcgaa
ggggctttttatggtcccaaaattgaattgtcactgacagattctatgggaagacgctgg
cagtgtggcactatccagtttgatttcaatttgcctgaaagattcgatgttcactacaca
aatgagcaaggtgaattcgaacggccagtgattatgcaccaagctatgtatggttctatc
gagcgttggttggggattctcttggaagtctcacagggtaacctgccggattggttgcat
cccgtgcctgttgctatcgcttcagtgaatgagtcaaacagccaatttgtccgtcagtta
gccgcactatgtttagcacgagacatgcgagtgttgattgatatcagtcaaaactcagtt
gcccgcaaaatgaaacgttttcacaagcaaaaagtgccttatatcttaacggttggggat
aaggaggaggctgaaaatagggtttcagttaagtgccgcaaagacggtgttatgacacac
atccctctttttgaattagctgactacctcgcggataaactagaatgcaagctataa
DBGET
integrated database retrieval system
