Shewanella oncorhynchi: RA178_18540
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Entry
RA178_18540 CDS
T09381
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00260
Glycine, serine and threonine metabolism
sog00630
Glyoxylate and dicarboxylate metabolism
sog00785
Lipoic acid metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01200
Carbon metabolism
Module
sog_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RA178_18540 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RA178_18540 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RA178_18540 (gcvP)
Enzymes [BR:
sog01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RA178_18540 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WMB72394
UniProt:
A0AA50KCJ2
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All DBs
Position
complement(4175002..4177890)
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AA seq
962 aa
AA seq
DB search
MTKQTLTQLEQHDLFLRRHIGPDSSQQQAMLNYVGAESLDDLTAQIVPESIRLSQDLSIG
DSCGEAEGIAYIRGLAKQNQVFKSYIGMGYYGTQVPNVILRNVFENPGWYTAYTPYQPEI
AQGRLEAILNFQQVSMDLTGLDLASASLLDEATAAAEAMALAKRVSKAKKANIFFVADDV
FPQTLDVVKTRAECFGFEVVVGPASEAVNHELFGALFQYTNRFGQITDFSELFATLRAKN
VVVTVAADIMSLVLLKSPGAMGADVVFGSAQRFGVPMGFGGPHAAFFVARDEHKRSMPGR
IIGVSKDARGNRALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVFHGPDGLKTI
ASRIHRFADILATGLKAKGVNLVNSTWFDTVSIKGLDVAAVNARALAAEMNLRFDADGIV
GVSLDETTLRTDIEALFDVILGAGHGLDVAALDAQIVSQGSQSIPATLVRQDAILSHPTF
NRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFSPL
DQAKGFTQLIEELSTWLVNITGYDAVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICL
IPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKTKAAEVAENLSCIMITYPSTHGV
YEESIREICNIVHQHGGQVYLDGANMNAQVGLTSPGFIGADVSHLNLHKTFAIPHGGGGP
GMGPIGVKAHLAPFVAGHVVVKPGRVSDNNGAVSAAPYGSAGILPISWMYIKLLGSKGLK
KSTQTALLNANYVMKKLSEHYPVLFRGRNDRVAHECIIDLRPLKEASGVTEMDIAKRLND
YGFHAPTMSFPVAGTLMIEPTESESKVELDRFIDAMVSIRAEIAKVESGEWPADNNPLYN
APHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLMCSCAPLSD
YE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaaccctcactcagttagaacagcacgatttattcctacgtcgtcatatc
ggcccagatagcagccaacagcaagccatgctgaactatgttggtgctgagtctctggac
gatctgaccgcgcaaatcgtgcctgagtcgatccgtttaagccaagacctgagcattggt
gattcctgcggcgaagccgaaggcattgcttacattcgtggtttagcgaaacaaaaccaa
gtatttaagagctatatcggcatgggttactacggcactcaagtgccaaacgtgatcctg
cgtaacgtatttgaaaacccaggttggtacacggcttatacgccatatcagccagaaatc
gcccaaggccgtttagaagccattctaaatttccaacaagtgtcgatggacttaacgggt
ttagatttggcttctgcttctttgttagatgaagctactgctgctgccgaagcgatggcg
ctggcaaagcgcgtttctaaagcgaaaaaagccaatatcttcttcgttgccgatgatgtg
ttcccgcaaaccttagacgtagtgaaaacccgcgctgagtgttttggttttgaagtggtg
gttggccctgcatctgaggccgttaaccatgagctgtttggtgctttgttccaatatact
aaccgttttggtcaaatcactgacttcagcgaattattcgcaactctgcgtgcgaagaat
gtggttgtgactgtcgccgccgacattatgtccttggtattactgaaatcaccgggcgct
atgggcgccgatgtggtattcggtagtgcgcagcgttttggcgtgccaatgggctttggt
ggcccacacgcggccttcttcgttgcccgtgacgagcacaaacgttctatgcctggccgt
atcattggtgtgtcaaaagacgcccgtggtaaccgcgcactgcgtatggcaatgcaaact
cgtgagcaacatatccgccgcgaaaaagccaactcaaacatttgtactgcacaaattctg
ttagcgaatatggcgtctttctacgccgtattccacggcccagatggcctgaaaactatc
gcgtcacgcattcaccgtttcgccgacattttagcgacaggcttaaaagcgaagggcgtg
aacttagtcaacagcacttggtttgatactgttagcatcaaaggcttagatgttgctgcc
gtcaatgcacgcgcactggctgctgaaatgaatctacgtttcgatgccgatggtattgtg
ggcgtgagcttagacgaaaccacgttgcgcacagatatcgaagccctgttcgatgtgatc
ttaggtgccggccatggtttagatgttgccgcgttagacgcgcaaatcgtgagccaaggt
agccaatcgattccggcgacacttgtgcgccaagatgcgattttaagccacccaaccttc
aatcgctatcaaagcgaaaccgagatgatgcgttatatcaaacgtctcgaaagcaaagac
ttagcacttaactactcgatgatttcactgggctcttgcaccatgaagttaaacgcagcg
gttgaaatgctccctgtgagctggcctgaatttgccaacatgcacccattcagcccactg
gatcaagccaaaggctttactcagttgattgaagagttgtcgacttggttagtgaacatc
acaggctacgacgctgtgtgcatccaacctaactctggcgctcaaggtgaatacgctggc
ttattagccatcaagaaataccatgagtcacgcggcgatgcgcacagaaacatctgtttg
atcccgcaatcagcccacggtactaaccctgcatcggcgcaattagctggtatgcaagtg
gtggtgacggcctgtgacaagcaaggtaacgtcgatttagaagatctgaagacgaaagct
gccgaagtggctgaaaacctgtcttgcatcatgatcacttacccatcgacccacggtgtg
tatgaagaatctatccgcgaaatctgcaacatagtgcatcagcacggtggtcaagtgtac
ttagatggcgccaacatgaacgctcaggtcggcttaacgtctcctggctttatcggtgcc
gacgtatcacacctcaacctgcacaaaaccttcgcgattccacacggcggcggtggtcca
ggtatgggcccaatcggcgtgaaagcacacttagccccatttgttgcgggccacgttgtg
gtgaaaccgggccgcgtgagcgacaacaacggcgccgtatcagccgcaccttacggtagc
gcgggcattctgcccatcagttggatgtacattaagctgcttggttcaaagggcctgaaa
aagtcgacccaaactgcgctgttaaacgctaactatgtgatgaagaagctgtcggaacac
tacccagtattgttccgtggccgtaacgatcgcgtcgcgcatgaatgtattatcgaccta
cgcccactgaaagaagcttcaggcgtgaccgaaatggatatcgctaagcgtttgaatgac
tacggtttccacgcgccaaccatgagcttccctgttgcgggaaccctgatgattgagcca
acggaatctgagtctaaggtggaactcgatcgtttcatcgacgctatggtgtcaatccgc
gctgaaatcgccaaagtggaatcgggcgaatggccagcggacaacaacccgctgtacaac
gcaccgcacactatggccgatatcatggacccagagtttgatacgcgtccatacagccgc
gaagtggccgtgttcccaagtgcagcagtacgcacgaataagttctggccaaccgtgaat
cgtattgatgatgtctacggcgaccgtaacttgatgtgttcgtgtgcaccattatcagac
tacgagtaa
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