Shewanella oncorhynchi: RA178_19210
Help
Entry
RA178_19210 CDS
T09381
Name
(GenBank) formate--tetrahydrofolate ligase
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00670
One carbon pool by folate
sog00720
Other carbon fixation pathways
sog01100
Metabolic pathways
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
sog01240
Biosynthesis of cofactors
Module
sog_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
RA178_19210
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RA178_19210
Enzymes [BR:
sog01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
RA178_19210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FTHFS
Motif
Other DBs
NCBI-ProteinID:
WMB72520
LinkDB
All DBs
Position
complement(4329644..4331356)
Genome browser
AA seq
570 aa
AA seq
DB search
MLTDMDISNRASLKDINELGADLGLLPEEMMQFGHTKAKVELSVLQRLAGQRKGKLIIVT
AVTPTPHGEGKTVTSIGLTQSLNAIGKKACACIRQPSMGPVFGVKGGAAGGGYAQVVPMQ
EMNLHLTGDIHAVSSAHNLGAAAIAARLFHEARLGKAEFEAQSGQAFLDIDPNEIRWHRV
VDHNDRCLRQIQVGLGDNNGPEYASSFDITAASELMAILALSHNLADMRARIGRLVLALN
IQGQVITAEDFGVAGAMTAIMADAIKPTLMQTLNGSPCLIHAGPFANIAHGNSSIIADDI
ALRLADFVVTEAGFGSDMGFEKFCNIKVRQSGQVPAAAVLVTTLKALKANSGLVSESDIN
TPDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDTDAELQWLTAAVNASSAFGCEV
SDAFSQGEAGAIALAQTVFRAAETESQFKLLYSDEASLEAKLSTLAEVGYGAAGVSLSIE
AKQQAQQLTVLGYGHLPLCMAKTPLSISHDPSLKGVPQDFEIPVRDLVLHAGAGFITALV
GNVMTMPGLGLKPGYLKIDIDAQGEIVGLG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagatatggatatttcgaatcgcgctagcctaaaagacattaatgaactgggc
gccgacttaggtctattacccgaagagatgatgcaatttggtcacactaaagccaaggtc
gagctcagtgtgttgcagcgtttagctgggcaacgcaaaggcaaattgattatcgtcacc
gcagtcacgcctacgcctcacggtgaaggtaaaacagtgacgagcattggcttaacgcaa
tcgttaaatgccataggcaaaaaggcctgtgcctgtattcgccagcccagcatggggcct
gtatttggggtgaaaggtggcgctgcgggtggcggttatgcgcaagtggtgcccatgcag
gagatgaatttgcatctcacgggtgatattcatgccgtgagcagtgcccacaatttaggg
gctgcagcgattgcggcgcggctatttcatgaagcgcgcttaggtaaggcggaatttgag
gcgcaatctgggcaagcgtttttagatatcgatcccaatgagattcgttggcaccgagtg
gtcgatcacaacgatcgctgtcttaggcaaatccaggtgggcttaggcgataataatggc
ccagagtacgcctccagttttgatatcaccgccgcctcagagttaatggcgattttagcc
ttaagtcataatttggcggatatgcgggcgcggatcggtcgtttagtgctggccttaaat
atccaagggcaagtgattaccgccgaagacttcggtgtcgctggtgcgatgacggccatc
atggcggatgcgataaagccgacgttaatgcagaccttaaatggttcaccttgccttatc
catgcgggaccctttgccaatattgcccacggtaattcatccattattgccgatgatatc
gccctcagactggcggattttgtggtgactgaagctggttttggatcagatatgggcttt
gaaaagttctgtaatatcaaggtgcgtcaatcgggtcaggtgcctgctgccgctgtgctg
gtcaccaccttaaaagcgctgaaggccaatagtggtttggtgtctgagtcagatatcaat
accccagatcaggctcgactcgaagcgggctttgcaaatttaaactggcatatcaacaat
gtggctcgctatggtattccggtggtggttgccattaaccgtttcgccactgatactgat
gccgagttgcaatggctaactgcggctgttaacgcgagcagcgcctttggctgtgaggtc
agcgatgcttttagccaaggggaggcgggcgctatcgccttagcgcagactgtgtttcgc
gccgctgaaaccgagagtcagttcaagctgttatattcagatgaagcctcattggaggct
aagttatccaccttagccgaggtggggtatggcgcagcgggcgttagcctttctatcgag
gccaaacaacaggcgcagcagctgaccgtattaggttatggacatttgcccctgtgtatg
gccaaaacgccgttatcaattagtcacgatcctagcttaaagggcgttcctcaggacttt
gagatcccagtgcgggatttagttttgcatgctggtgcggggtttatcaccgccttggtg
gggaatgtgatgactatgccaggacttgggctgaaaccgggttacttaaaaattgatatt
gatgcgcaaggtgagatagtcggcttaggctaa
DBGET
integrated database retrieval system
