Shewanella oncorhynchi: RA178_19380
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Entry
RA178_19380 CDS
T09381
Name
(GenBank) efflux RND transporter permease subunit
KO
K15726
heavy metal efflux system protein
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_19380
Transporters [BR:
sog02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RA178_19380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6249
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WMB72551
UniProt:
A0AA50KD97
LinkDB
All DBs
Position
complement(4364416..4367640)
Genome browser
AA seq
1074 aa
AA seq
DB search
MLQKLIEAAIKNRLLVVLALLAVIVGCVAMLPKLNLDAFPDVTNVQVTINTAAEGLAAEE
VEKLISYPVESAMYALPAVTEVRSLSRTGLSIVTVVFAEGTDIYFARQQVFEQLQAAREM
IPSGVGVPEIGPNTSGLGQIYQYILRAEPNSGINAAELRSLNDYLVKLILMPVGGVTEVL
SFGGDVRQYQVQVDPNKLRAYGLSMAQVTEALESNNRNAGGWFMDQGQEQLVVRGYGMLP
AGDAGLTAIAQIPLTEARGTPVRIGDIAQVDFGSEIRVGAVTMTRRDESGQVQNLGEVVA
GVVLKRMGANTKATIDDIGARVSLIEQALPDGVSFEVFYDQADLVDKAVTTVRDALLMAF
VFIVVILALFLVNIRATLLVLLSIPVSIGLALMVMSYYGLSANLMSLGGLAVAIGMLVDG
SVVMVENIFKHLTQPDRRHLSEARARADGEDDPYHSEEDGAKACGDVSESNMVIRIMLAA
KEVCSPIFFATAIIIVVFAPLFALEGVEGKLFQPMAVSIILAMMSALLVALIAVPALAVY
LFKRGVVLKQSVVLAPLDAAYRKLLTATLARPKVVMLSALVMFGLSLLLLPRLGTEFVPE
LEEGTINLRVTLAPTASLGTSFQVAPKLEAILLAFPEVEYALSRIGAPELGGDPEPVSNI
EVYIGLKPIAEWQSASSRLELQRLMEEKLSVFPGLLLTFSQPIATRVDELLSGVKAQLAI
KIFGPDLAVLSQKGQALTDLVAKIPGAVDVSLEQVSGEAQLVVRPKRELLARYGISVDQV
MSLVSQGIGGASAGQVIDGNARYDINVRLAAEFRQSPDAIKDLLLSGTNGATVRLGEVAS
VEVEMAPPNIRRDDVQRRVVVQANVAGRDMGSVVKDIYALVPKADLPAGYTVIIGGQYEN
QQRAQQKLMLVVPISIALIALLLYFSFGSFKQVLLIMANVPLALIGGIVALYVSGTYLSV
PSSIGFITLFGVAVLNGVVLVDSINQRRQSGEALYDCVYEGTVGRLRPVLMTALTSALGL
IPILLSSGVGSEIQKPLAVVIIGGLFSSTALTLLVLPTLYRWLYRGDKRIDELG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaaagttaatcgaagccgcgattaaaaatcggctgttagtggtattggctctg
ctcgccgtgattgtgggctgcgtggccatgctgccaaagttgaatctcgatgcctttcct
gatgtgacgaacgtgcaagtgaccatcaatacagcggccgaaggcttagccgctgaagag
gtggaaaaactcatcagttatccggtggaatcggccatgtacgccttgccagctgtgact
gaggtgcgctcgttatcgcgcactggcttgtcgattgtgactgtggtatttgccgagggg
acggatatttacttcgctcgtcagcaagtgtttgaacagttgcaggcggcgcgggagatg
atcccaagcggcgtcggagtgcctgaaatcggccccaatacctcgggattagggcagatt
tatcagtacattctgcgcgccgaacctaactctggcattaatgccgccgagctgcgtagc
ttaaatgattatctggtgaagttgatattgatgcccgtgggcggcgtgactgaagtcttg
tcttttggtggcgatgtgcgccaataccaagtgcaggtcgacccgaataaactgcgtgcc
tatggcttgtctatggcgcaggtgacagaagcgctagagagcaataaccgtaacgctggc
ggttggtttatggaccaaggccaagagcaacttgtggtgcgcggctatggcatgttgccc
gcaggagacgctggattaacggcgatcgcgcagatccctctgaccgaagccaggggtacg
ccagtgcgtattggcgatatcgctcaggtggatttcggcagtgagatccgtgtcggggct
gtgactatgacgcgccgcgatgaatcgggccaagtgcaaaatctcggtgaagtggtggct
ggtgtcgtgctcaaacgtatgggggcaaacactaaggcgacgattgacgatattggtgcg
cgggtgagccttatcgagcaggcattgcccgatggcgtgtcctttgaggtgttttacgac
caagcggatctggtcgataaggctgtgaccacagtgcgcgatgcgctgctaatggccttt
gtgtttatcgtggtgattttggcgttgttcctcgtcaatatccgcgcgaccttgctggtg
ctgttgtcgattccagtgtctatcgggctcgcacttatggtgatgtcctattatggtttg
tcggcaaacctgatgtcgctcggcggcttagctgtggcgattggtatgttagtcgatggc
tctgtggtgatggtagagaatattttcaaacacttaactcaacctgatcgccgccattta
tccgaggcgagggcgcgtgccgatggtgaggatgatccctatcacagtgaggaggatggt
gctaaagcctgtggtgatgtcagcgaatcgaatatggttattcggataatgctcgcggcg
aaagaggtatgtagtccaatcttcttcgccaccgccattattatcgtcgtatttgcgcca
ttatttgcccttgaaggggttgaaggcaagctgttccagccgatggcggtcagtattatt
ttggcaatgatgtcggccttgctggtggcgctgattgccgtgccagcccttgcagtgtat
ctttttaagcgcggtgtggtgctcaaacaaagtgtggttttagcaccgctggatgccgct
tatcgcaagctactcacggcaacgcttgctaggccaaaggtggtgatgctcagcgccttg
gtgatgttcggcttgagtctattattgctaccaaggctgggtaccgaatttgtgcctgaa
ctggaggaaggcacgattaacttgagggtgacgctggcaccaacggcgagtttagggact
tcgttccaagtcgcacctaagcttgaggctattttgctagcatttcccgaggtggaatat
gccctgagccgcattggtgcgcctgaactgggcggcgatcctgagcctgtgagtaatatt
gaagtctatattggcttgaaaccgatagcagagtggcagtcggcaagctcgcgcttggaa
ctgcaacgcttgatggaggaaaaactcagcgtgttccccggactcttgttgaccttttcg
cagccgattgcgactcgggtagatgaattactttcgggggtaaaagcccagctagcgatt
aaaatcttcggccctgatttagcggtattgtcacagaaaggccaagcacttactgatctc
gttgcgaaaatccccggtgccgtggatgtgtcgcttgagcaagtgagcggcgaggcgcaa
ttagtcgtgcggcccaaacgcgagctattggcgcgttacggcatcagtgtcgatcaagtg
atgagcctcgtcagccaaggcattggcggcgcgagtgcagggcaagtgatcgatggcaat
gccagatacgacatcaatgtgcgactcgcggccgagtttcgccaaagccctgatgcgatt
aaagacttattactcagtggtacaaatggcgccacagtgcgcttaggggaagtcgccagc
gtcgaagtggaaatggcgccgccgaatattcgccgtgacgatgtgcagcgccgtgttgtg
gtgcaggccaacgtggcaggacgcgatatgggctcggttgtaaaagatatttatgctcta
gtgccaaaggcggatttgcctgcgggatatacagtgatcattggcggccaatatgagaat
cagcagcgggcgcagcaaaagttgatgctagtggtgccgatttctatcgccttgatagcc
ttgttgttgtacttctcctttggttcattcaagcaagtgttgctcatcatggcgaacgtg
cccttagctttgattggcggcatagtggccctgtatgtcagtggcacttatttatctgtg
cctagctctattggctttatcactctatttggggtggctgtgctcaacggtgtagtgctg
gtggattcgattaatcagcgcagacaaagcggcgaagcactctatgattgtgtttatgag
ggcacagttgggcgtttgcggccggtattgatgacggcactgacctcggccttaggtttg
atcccgattttattgtcatcgggtgtcggcagtgagatccaaaagccgctggcagtggtg
attattggtggcttgtttagctcgacggcgctgaccttactcgtcttgccgaccttgtat
cgctggctatatcgcggcgataagcgcattgatgagctcggttaa
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