Shewanella oncorhynchi: RA178_19730
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Entry
RA178_19730 CDS
T09381
Name
(GenBank) EAL domain-containing protein
Organism
sog
Shewanella oncorhynchi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
PAS_8
PAS_10
MC1
Motif
Other DBs
NCBI-ProteinID:
WMB72620
UniProt:
A0AA50KCT0
LinkDB
All DBs
Position
complement(4445320..4447899)
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AA seq
859 aa
AA seq
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MHIGKKIMVFIAGFCLPAVVIVSYCLGYWYDHRVELLRQDSANRELANIQQQFQIDVDRL
TFLTNIYALPLSQLDEDQLKKLESSWRDSSMSANLSWYILRQGELHPFFPNERPFENDKL
REIASAIVSADKPSVAGAYLMGKYAYVVTSVASAPNESVLLVRQLTDKDLLEYAQALLVT
KVSMSHSRDVTPTVDGVHSDAINIPSLLKDKPVYLQVLFSDGPFREVKFQLDWVSLGFIL
FGVFIVGLGYIWLRSGLLKPFKNLMHQLALVDPMSSVYQPVTSEGNEELEVLASRVNSLL
ARIYQQKERAKITLESIAEAVILTDVDANVIYMNPRAELLLDVASCYAIGQSLASLLKAG
EQLNQAVFTCIRLEESAPQVEKIKLLTASPRIMERSISNLRNHDKEIVGTVVVLRDITQE
ELLKHQLQKRANFDSITGLLNRQAFDEQLPQFAASAKTIAVCYLDLEQFKLINDSCGHTA
GDRMLAMVAKAMQACLGSQELLARLGGDEFGLVICNRSALSVAQLLKQMIAQVSMQVLND
KNCNYKVGLSIGVAFGRAPYIDAQELLKDADIACIAAKAKGANQIHFYDDKDKELTYQRN
APKWAVRIAQAIEENELILYYQPIRGLGSGPQRQRMEILLRIQEPCGRILAPAQFIAAAE
RFKLMPDIDKEVIRKAFLWLSLNPVLWPDHCISINLSGNSLGAEGMVEYIAQQQHIFDIP
SQCICFEITETTAIQNRNRGMEMLKQLRKLGFSFALDDFGSGFASYGYLRELPVDYVKID
GCFIKNLAVNAKDYAIVKSIQDVCRVMGIETVAEFVENQDIIDRLLSIGINYAQGYAIGR
PQPLANYREQYEMRLAQRA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcacattggcaagaaaataatggtatttattgcgggcttttgtctccctgcggtggta
attgtctcctattgtcttggttattggtacgaccaccgtgtcgagctattacgtcaagat
agtgctaaccgtgagcttgccaatatccagcagcagtttcaaattgatgtcgatcgctta
acctttctcactaatatctatgccttacctttgtctcaattagatgaagaccaacttaaa
aagcttgaatcctcgtggcgcgatagctcaatgtcagccaatctgagttggtatattcta
cggcagggtgaattgcacccttttttccccaatgaacgtccctttgagaatgataagtta
cgagaaatcgccagtgctattgtcagtgccgacaagcccagtgttgctggcgcttatttg
atgggcaagtatgcttatgtcgttacttccgtggcttctgcgcccaatgaatctgtgctg
ctggtacgccaactgactgataaagacttactggaatatgctcaagccttattggtgact
aaggtgagcatgagccattctcgcgacgttacaccaacagttgatggtgtgcacagtgac
gcgattaacattccaagcctgctaaaagataagcctgtctacctgcaagtactgttttcc
gatggtccctttagggaggttaaatttcaactcgattgggtatcgctcggatttattctc
tttggtgtgtttattgttggtcttggttatatttggctgcgttcgggcttactcaaaccc
tttaaaaatctgatgcatcaattggcgctggtcgatcctatgtctagtgtctatcaaccc
gttacaagcgagggtaatgaagaattagaagtgctcgccagccgtgttaatagcttgctg
gcaagaatttatcagcaaaaagaacgcgcgaaaatcaccttagaatccattgctgaagcg
gtgattttgaccgatgtcgatgccaacgtgatttatatgaatccgcgggccgagttgctt
ctcgatgtcgccagttgctatgccataggtcagagccttgcgagtctgttaaaggctggg
gagcagttgaatcaggcggtttttacctgcattcgtctcgaagaatcagcgccgcaggtc
gagaaaatcaagctattaactgcttcgcctcggattatggagcgcagtattagcaatctg
cgtaatcacgataaagaaattgttggtactgtcgtggtattgcgggatatcactcaagaa
gagttgcttaaacaccagctacaaaaaagggcaaatttcgatagcataacagggctgcta
aaccgtcaggcatttgatgagcagttaccccaatttgccgcttcagccaaaactatcgcc
gtttgttaccttgatttggagcaattcaagttgattaacgacagctgtggccatactgca
ggcgatcgtatgcttgctatggtggctaaggcaatgcaggcttgtcttgggtcacaggag
ctattggcgcgccttggtggcgatgagtttggtttagtgatttgtaatcgtagtgcctta
tctgtggcgcaattactgaagcaaatgatcgcgcaagtctccatgcaagtgttgaacgat
aagaactgtaattataaagttggcctcagcataggtgtcgcttttggtcgtgcgccctat
attgatgcgcaagaattattaaaagacgctgatatcgcctgcattgccgctaaagctaag
ggtgctaatcaaattcatttttacgatgataaagataaagaactcacctaccaaagaaat
gcgcctaagtgggcggtacgtatcgcgcaagcgattgaagaaaacgagttgatcctttat
taccaaccgatccgcgggctaggcagtggtccgcagcgacaacgaatggaaatcctgtta
cgaattcaagagccctgtggccgcattttggcgcctgcgcagtttatagccgccgctgaa
cgttttaagttgatgcctgatatcgataaagaagtcatccgcaaagcttttttatggttg
tctttgaaccccgtgctttggcctgatcattgtatttcgattaacctttcgggcaatagt
ttaggcgccgaaggtatggtggaatatatcgcccagcagcaacacatttttgatattcca
agccaatgtatttgcttcgaaattactgaaaccaccgcgatccaaaatcgcaatcgtggt
atggaaatgttgaagcagttacgtaaactcggtttttcatttgcactggatgattttggc
agtggttttgcctcttatggctatctgcgtgagctgcccgtggattatgtcaaaatcgac
ggctgttttattaagaatctcgccgtgaatgctaaagactacgccatcgttaaatcgatt
caggatgtttgtcgggttatgggaatcgagactgttgctgaatttgttgagaatcaggat
attattgacaggttgttgagcataggcattaactatgcgcaaggttatgcgatagggcgc
ccgcaacccttagctaattatcgtgagcaatacgagatgaggcttgcacaacgcgcgtga
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