KEGG   Shewanella oncorhynchi: RA178_19845
Entry
RA178_19845       CDS       T09381                                 
Name
(GenBank) type II secretion system F family protein
  KO
K02653  type IV pilus assembly protein PilC
Organism
sog  Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:sog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sog02044]
    RA178_19845
   02035 Bacterial motility proteins [BR:sog02035]
    RA178_19845
Secretion system [BR:sog02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   RA178_19845
Bacterial motility proteins [BR:sog02035]
 Pilus system
  Pilus assembly proteins
   RA178_19845
SSDB
Motif
Pfam: T2SSF
Other DBs
NCBI-ProteinID: WMB72638
UniProt: A0AA50Q632
LinkDB
Position
4483769..4485037
AA seq 422 aa
MATATTVRKSRGKKNEQKSQPKIYTFEWKGVNRDGKKTAGELRGATAAEIRSQLKSQGVN
PKSVRKQSSPLFKLGEANITPMDIAMMTRQVATMLAAGVPLVTTFELLGRGHEKAKMREL
LGTILTDIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSGSLDLVFDRVATYREKTEALK
SKIKKAMFYPAAVVIVALLVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS
WYIFLAAIVGGVFLFVRAHRNSQMVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNAVYRKAILNIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGE
ESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKI
VS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctacggcaacaacagtaagaaagtctcgcggcaaaaaaaacgagcaaaaaagccag
cccaaaatctataccttcgaatggaaaggcgtaaatcgcgacggcaaaaaaacggcagga
gagcttagaggtgcaaccgcagccgaaatccgtagtcagcttaaatcccaaggagtaaac
cctaagagcgttcgtaagcagtcctctccgctatttaagttaggtgaagccaatatcacc
cctatggatatagcaatgatgacccgtcaagtcgcgactatgttggcggcaggcgttcct
ttggtaacgacatttgaactactcggccgtggccatgaaaaagctaaaatgcgggaatta
ctgggtactattttaaccgacattcaatcgggtattcccttatccgatgccatgcgcccc
catagacgttacttcgacgaactttatgtagacttagtcgccgcaggtgagcactcaggt
tcactcgatttggttttcgatcgcgtcgcaacctacagagaaaaaacggaagcgctcaaa
tcaaaaattaagaaagccatgttctatcctgcagcggtcgtcatagtcgcgcttttagtc
acgacattgttattactctttgtcgtacctcaattcgaggaaatttttaagggctttggt
gcagaactacccgcctttacgcaactggtactgcatatttcccgcggcttacaatcctct
tggtacatctttttagccgctattgttggcggcgtatttttgtttgtacgagcacaccga
aactcgcaaatggtgcgagatagagtcgatgaagccgtgcttaaaatcccagccattgga
ccgattttacacaaaggtgccatggctcgtttcgcccgcaccttagctaccacatttgca
gcaggtgtgccgttaattgatggcttagaatccgccgctggcgcatcgggtaatgccgtt
tatcgcaaagccatattgaatattcgccaagaggtcatggcgggaatgcagatgaatgtc
gcaatgcaaaccacagggctttttcccgatatgttagtgcagatggtgatgataggcgaa
gaatccggctcgctggataacatgctcaacaaagtctcaaccatctatgaaatgcaggtc
gacgatgcggttgatggtttatcaagcctaattgaacctattatgatggtagtcataggt
actgtggtcggcgggttaattgtcgctatgtatcttcctatcttccaaatgggtaaaatc
gtcagttaa

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