Shewanella oncorhynchi: RA178_19930
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Entry
RA178_19930 CDS
T09381
Name
(GenBank) fumarate reductase iron-sulfur subunit
KO
K25995
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00020
Citrate cycle (TCA cycle)
sog00190
Oxidative phosphorylation
sog00620
Pyruvate metabolism
sog00650
Butanoate metabolism
sog00720
Other carbon fixation pathways
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA178_19930
00620 Pyruvate metabolism
RA178_19930
00650 Butanoate metabolism
RA178_19930
09102 Energy metabolism
00190 Oxidative phosphorylation
RA178_19930
00720 Other carbon fixation pathways
RA178_19930
Enzymes [BR:
sog01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RA178_19930
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
RA178_19930
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Gene cluster
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_16
Fer4_10
Fer4_9
Fer4_2
Fer4_17
Fer4_7
Fer2
Fer4_6
Fer4_4
Fer4
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
WMB72655
UniProt:
A0AA50Q6B5
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Position
complement(4501205..4501936)
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AA seq
243 aa
AA seq
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MSQGRQLTFNIFRYDPQEPNDKPKMVRYQLTETPGMTVFIALNKLREEQDTSLQFDFVCR
AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL
KLWLHPKPNDISVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMRETFVGAVGMM
KIARFEMDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMAM
TLI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggtcgtcagttaacctttaatatctttcgttatgatccgcaggagccaaac
gataagccgaaaatggtgcgttatcagcttaccgaaacgccggggatgacggtatttatc
gcccttaataaactcagggaagaacaagacacttcattgcagttcgactttgtttgtcgt
gcaggtatctgtggtagctgcgctatggtgatcaacggtttcccgacgctagcttgccgc
accttaacggccaaatatcctaagggcgaaatcaccttaatgccgctgccaggttttgag
ttgattggtgatctctcggttaacactggtaagtttatgcgggaattggccgaacgctta
aagctgtggttacatcctaaacctaatgatataagcgtgcatcgacttgaagatcctatg
gatccagatgaagctgcgcgtttgtatgagctagagcgctgcgttgaatgtggcgtgtgt
gtttccgcctgtgcgactaaacaaatgcgtgaaacttttgtcggcgctgtgggtatgatg
aaaatagctcgttttgagatggatagccgtgacgctcgtactgccgaggatttttaccat
gtgattggcaatcaggatggcgtgtttggctgcatgactttactcggctgccaagataac
tgccctaaggatttgccacacatgcagcaaatcgcctatttacgccgcaagatggccatg
actttgatttga
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