Shewanella oncorhynchi: RA178_19990
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Entry
RA178_19990 CDS
T09381
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sog03036
]
RA178_19990 (xerC)
Chromosome and associated proteins [BR:
sog03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RA178_19990 (xerC)
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
WMB72665
UniProt:
A0AA50KCV7
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Position
complement(4512836..4513756)
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AA seq
306 aa
AA seq
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MSTQTGEVSALNTQWLQTFERYLSTERQLSAHTVRNYLYELNRGSDLLPEGVHLLNVSRE
HWQQVLAKLHRKGLSPRSLSLCLSAVKQWGEFLLREGVIELNPAKGLSAPKQTKPLPKNI
DVDAISHLLDIEGTDPLSLRDKAMMELFYSSGLRLAELAALNLSSVQYDLKEVRVLGKGN
KERIVPVGRLAITALQNWLNCRKQIPCEDNALFVTEKGKRLSHRSIQARMAKWGQEQALS
VRVHPHKLRHSFATHMLEASADLRAVQELLGHANLATTQIYTSLDFQHLAKVYDNAHPRA
KKTQDK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcaaacaggcgaagtgtcggcattaaatactcaatggttacaaacctttgaa
cgttatctgagtaccgagcgacagttgtctgcccatacagtacgtaattacctttatgag
cttaatcgcggtagcgatctcttgcccgaaggcgtgcatttactcaatgtgagccgcgag
cattggcagcaagtgttagccaaattgcaccgcaaaggtttaagcccgcgatcgctttct
ctgtgtttatctgcggtaaaacaatggggtgaatttttgctgcgcgaaggcgtgattgag
cttaatcccgccaaaggcttaagtgcccccaaacagaccaaacctctgccgaagaatatc
gatgtcgatgccatcagtcatttgctggacattgaaggtacagatccgctgagtctgcgt
gataaagccatgatggaattgttttattccagtggcttacgtttagcagaacttgccgcg
ctcaatttatccagtgtgcaatacgatttgaaagaagtgcgagtcttaggtaaaggtaat
aaggagcgtatcgtccctgtcggtcgtttagcgattactgcgctgcagaattggctcaat
tgccgaaagcagatcccctgtgaagataacgccttatttgtgactgaaaaaggtaagcga
ctttcccatcgcagtattcaggcgcgcatggctaaatggggtcaagagcaggcattatcg
gtgcgagtacatccccataagctgcgtcattcctttgccactcacatgttagaagcgagc
gccgacttgcgggcggtgcaagaattattgggtcatgcgaacctagcgaccacacaaatt
tataccagtttggatttccaacacttagctaaggtgtatgataacgcccatcctagagcg
aaaaaaacacaggataaataa
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