Shewanella oncorhynchi: RA178_20000 Help Entry RA178_20000       CDS       T09381                                  Symbol dapF Name (GenBank) diaminopimelate epimerase   KO K01778   diaminopimelate epimerase [EC:5.1.1.7] Organism sog  Shewanella oncorhynchi Pathway sog00300   Lysine biosynthesis sog00470   D-Amino acid metabolism sog01100   Metabolic pathways sog01110   Biosynthesis of secondary metabolites sog01120   Microbial metabolism in diverse environments sog01230   Biosynthesis of amino acids Module sog_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:sog00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     RA178_20000 (dapF)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     RA178_20000 (dapF) Enzymes [BR:sog01000]  5. Isomerases   5.1  Racemases and epimerases    5.1.1  Acting on amino acids and derivatives     5.1.1.7  diaminopimelate epimerase      RA178_20000 (dapF) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DAP_epimerase PhzC-PhzF Pro_racemase Motif Other DBs NCBI-ProteinID:  WMB72667 UniProt:  A0AA50Q597 LinkDB All DBs Position complement(4514440..4515267) Genome browser AA seq 275 aa AA seqDB search MIQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFH YRIFNADGTEVEQCGNGARCFARFVRNKGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMG VPILEPSLIPFKAKKAEKTYLLQTPLQTFLCGAASMGNPHCVLDVEDVASAAVAEIGAML TKHERFPRGVNVGFMQVVDSGHIKLRVYERGAAETLACGTGACAAVVVGQVQGKLDQQVR VDLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL NT seq 828 nt NT seq  +upstreamnt  +downstreamnt ttgatccaattcactaagatgcacggactgggtaacgattttatggtggtcgatggggtc acgcagaacgtgttcttttcgcctgagcagatccgccgtttagccgaccgtaactttggc ataggtttcgatcaattactgttggttgagccgccctatgatcccgatttagattttcat tatcgcatcttcaatgccgatggtactgaagtcgaacaatgcggtaatggcgcccgctgt tttgcccgctttgtacgcaataaaggattgaccaataagagtaaaatccgtgttagcact tcatcaggtaagatgactctgcgtttagagcgagatggcacagttaccgtgaatatgggc gtgcctattcttgaaccaagtctaatcccctttaaagccaagaaagccgaaaaaacctat ttactgcaaacaccactgcaaacctttttatgtggcgcggcttctatgggcaatccccat tgtgtgctcgacgttgaagatgtggcgagcgccgctgttgctgaaattggtgccatgctc actaagcatgagcgctttccccgtggtgtgaatgtgggatttatgcaagtagtggattcg ggccacattaagctgcgggtgtatgaacgtggtgcggccgaaactttggcctgtggcact ggcgcgtgtgcggccgtggttgtaggtcaagtgcaagggaagctcgaccagcaagtgcgg gtggatttacccggcggtactttaaccatcaactgggaaggcgaggggaaacctttgtgg atgacgggcccagcgcaacacgtttatgatggacaaattcagttatga

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