KEGG   Shewanella oncorhynchi: RA178_20070
Entry
RA178_20070       CDS       T09381                                 
Name
(GenBank) TolC family outer membrane protein
  KO
K12543  outer membrane protein, adhesin transport system
Organism
sog  Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:sog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sog02000]
    RA178_20070
   02044 Secretion system [BR:sog02044]
    RA178_20070
Transporters [BR:sog02000]
 Other transporters
  Pores ion channels [TC:1]
   RA178_20070
Secretion system [BR:sog02044]
 Type I secretion system
  Adhesin protein transporter
   RA178_20070
SSDB
Motif
Pfam: OEP DUF2333
Other DBs
NCBI-ProteinID: WMB72681
UniProt: A0AA50Q5Z8
LinkDB
Position
4550241..4551662
AA seq 473 aa
MKTSAIRQFQCSKIAIVLSLILLPLSAQSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQV
NQAIAGYMPTIDVNGGYGYEQTDSVSTRRRPNIGEVDSKGVAELNPGEFGVSIKQMLFDG
FYTSSEVDRYSFEASADQWALLAAAEDMALDVSKVYLNYLRTDEVLKLAEKNLNSHKEIY
DQIKQRTDSGLGSIADLSQISGRLARANANVISARNNLLDAKAQYVKIVAAAPADLILPV
PDADMLPKDLSSGIIVAQENHPILKSAANDISAAENERSSVQSNYYPQVSLELNGNWNND
ISGEDGISGAGAFRSDVGGHSNDLVAMVRVRYNLFAGGKDLAREKETAYKLGEAKEIRQR
AQREVVEGVNLAWNAFEMLAPQKQYIRDHVVAAKDTQTAYAQQFNLGQRSLLDLLDTENE
LFEARKDYLQAEYDEVIAKYRVLNSTGRLLDSLKVTRPDAWRGERNYEGGANK
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgaagacttcagcaatacgacaatttcaatgttcaaagatagccatagtgctgtcatta
atcctgttacctttatcggctcaaagtcagacgttagaacaagccgttgcacatacgcta
gatacaaacccagatttacgagtggccttcaaccgctttaaagcgcgagaagaacaagtt
aatcaagcgatagcaggctatatgccaactattgatgtcaatggtggctacggttacgaa
caaaccgacagcgtatcgacacgtagacgacccaatatcggcgaagtcgatagcaaaggg
gtggctgaattaaatcccggagagtttggtgttagcataaaacaaatgcttttcgatggt
ttctacaccagcagtgaagttgatcgttatagctttgaagctagcgcagaccaatgggca
ctgcttgctgctgctgaagatatggcactcgatgtcagtaaagtctatctcaactattta
cgcaccgatgaagtgttaaaattagccgagaaaaaccttaacagccataaagaaatttat
gaccagattaaacaacgtactgactcaggtttaggctcaatagcagatctatcccaaatc
tcgggacgtttggcgcgtgctaatgctaacgttatttctgctcgcaacaatttacttgat
gcaaaagcacagtacgtcaaaattgtagcggcggcaccggcagacttaatattaccagtg
ccagatgcagacatgctgccaaaggatcttagctctggcattattgttgcgcaagagaat
caccccatactcaaatctgcagcaaacgatattagtgccgcagaaaatgaacgctcttca
gtacaatccaattactatcctcaggtttctttagaactgaatggtaactggaataacgat
atcagcggcgaagatggaatatcaggtgctggtgctttccgcagtgatgtgggtggtcat
agtaacgatctcgtcgccatggtgagggtgagatacaacttatttgcggggggtaaagat
cttgcccgtgaaaaagaaactgcttacaagttaggtgaagcgaaagaaatccgccaacgc
gcccaacgtgaagttgttgaaggggtaaacctagcttggaacgcatttgaaatgctagcg
ccgcaaaaacaatatattcgcgatcatgtcgtggccgcaaaggatactcaaacagcctat
gcacaacagtttaatttaggccaacgcagtctactcgacttattagataccgaaaatgag
ctcttcgaggcacgtaaagactacttacaagctgaatatgatgaagttattgctaagtat
cgcgtgctcaattctacagggcgattattagactcacttaaagtcactagacctgatgcg
tggcgcggagagcgcaattatgaaggaggagctaacaaatga

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