Shewanella oncorhynchi: RA178_20640
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Entry
RA178_20640 CDS
T09381
Name
(GenBank) YgiQ family radical SAM protein
Organism
sog
Shewanella oncorhynchi
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_N
DUF3362
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WMB72780
UniProt:
A0AA50KCH0
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Position
complement(4687231..4689687)
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AA seq
818 aa
AA seq
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MQVESTLFSHPKYWATGDSTAPFLPMSRKEMDKLGWDSCDIIIVTGDAYVDHPSFGMAVI
GRMLEAQGYRVGIISQPDWSSKEAFMQLGRPNLFFGVTAGNMDSMINRYTADRRLRSDDA
YTAGDIGGKRPDRAVTVYTQRCKEAFKDVPVIIGGIEASLRRIAHYDYWSDKVRRSVIFD
AKADILMYGNAERPLVEVARRLAAGEPISSLHDVRGTAVIRKEPLPEWRGMDSRKIDQLH
KIEPLPNPYGADDVGCANLSGPSDVKIFDNEAPKPISVQPPKPKPWDKTYVLLPAFEKVS
EDKYLYAHASRILHQEQNPGCARALFQPHGDRAVWVNPPAWPLNTDEMDAVFDLPYQRIP
HPIYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSQESIVKEIKDIQDK
VPGFTGVISDLGGPTANMYRLGCTSEKAEKTCRRLSCVFPSICGHLGTDHKHTIDLYRAA
RAVPGIKKVLIASGVRYDLAIEDPAYVKELVQHHVGGYLKIAPEHTEEGPLSKMMKPGMG
AYDKFKELFDKFSKEAGKEQFLIPYFISAHPGTTDEDMVNLALWLKERKFKLDQVQNFYP
SPMANATTIYHTELNSLKNVKHTSEVVSVPKKGRQRRLHKALLRYHDPAGWPLIREGLTA
MGREDLIGNSPHQLVPPEGRNERGPKWMKDANQGQKAFTRFSGNQFDDRKGDGKSKGAAK
GGAQAQAGTESKPASKGGKPAANGAKPASSKPAGAKPTGSKPSGAHSSRPGAKAPFGQSG
FKAGGAQAKSGSQAKGGSPSKTGGKSAGKPSQGRQQAK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttgaatccacactctttagtcatcccaagtattgggccacgggcgacagcact
gcgcctttcttacctatgtctcgcaaggagatggataagcttggttgggatagctgtgac
atcatcatagtcacaggcgacgcttatgtggatcacccaagctttggcatggcggtgatc
ggccgtatgttagaggctcagggttaccgagttgggattatttcccagccagattggtcg
agcaaagaagcctttatgcaattgggccgcccgaatctgttttttggcgtcaccgccggt
aacatggattcgatgatcaaccgttacaccgccgaccgtcgtttacgttctgacgatgct
tataccgcgggtgatattggcggcaagcgcccagatcgcgccgtgactgtgtacacccag
cgttgtaaagaagcctttaaagatgtgcctgtgattattggtggtatcgaagccagtttg
cgccgcatcgcccattacgattattggtcggataaagtacgtcgtagtgtgattttcgat
gctaaggccgacattctgatgtacggcaacgccgagcgtcctttagttgaagtggcacgc
cgcttagctgccggcgaacccattagctcgctgcacgatgtgcgcggcacagccgttatc
cgtaaagagccgctgcccgaatggcgcggtatggactcgcgcaagattgaccaattgcac
aagatagagccgctgccgaatccttacggcgccgatgatgtgggttgtgctaacttgtct
ggcccgtcggatgtgaagatattcgataacgaagcccctaagccaattagcgttcagccg
cctaaacctaagccatgggataaaacctatgtgctgctgccagcgtttgaaaaagtctct
gaagacaaatatttatatgcccatgcttcacgaattttgcaccaagagcaaaacccaggt
tgtgcccgtgcgttatttcaaccccatggcgaccgcgccgtttgggtgaatccgcccgca
tggccgctcaataccgatgagatggatgcggtattcgatttaccctatcagcgtattcct
catccgatttacggcaaggaaaaaatccctgcctatgacatgatcaagacgtcaatcaac
atcatgcgtggttgctttggtggctgttctttctgctcgattaccgagcatgagggcaga
atcattcagagtcgttcacaagagtcgattgttaaagaaatcaaagatattcaggataaa
gtgccaggctttactggggtgatttccgatttaggcggcccaaccgccaacatgtatcgt
ttaggttgtaccagcgaaaaggctgaaaaaacctgtcgtcgtttatcctgcgtgttccca
tcgatttgcggccacttaggcacagatcataaacacactatcgacctatatcgtgcggca
cgtgccgtacctggcatcaagaaagtattgattgcctctggcgtgcgttacgacttggcg
atcgaagatccggcttatgttaaagagttagtgcagcaccatgtgggcggctacttaaaa
atcgcccctgagcataccgaagaaggtccgctcagtaagatgatgaagcccggcatgggc
gcctacgataagtttaaagaattgttcgacaagttttctaaggaagcgggcaaagagcag
ttcctgatcccttactttatttcggcgcatccaggcacgaccgacgaagacatggtgaac
ttagcgctgtggttgaaggagcgtaagttcaagctcgaccaagtacagaacttttatccg
tcaccgatggcgaatgcgaccacaatttatcataccgagttgaactcgctgaaaaacgtc
aagcacaccagcgaagtggtatctgtgccgaagaaagggcgtcaacgtcgcttgcacaag
gcattgctgcgttatcacgatcctgcaggttggccattgatccgtgaaggcttaactgcc
atggggcgtgaagacttgatcggtaatagtccgcatcagttagttccgccagaaggtcga
aatgaacgcggacctaagtggatgaaagatgccaaccaaggccaaaaagcctttactcgc
ttctcgggcaatcagtttgatgaccgcaagggcgatggcaaatctaaaggtgcggcgaaa
ggcggcgcgcaagctcaggctggtactgaatcaaaacctgccagcaaaggtggaaaacca
gcagcgaatggcgctaagcctgccagttctaagccagcaggagctaaaccaactggctct
aaacctagcggagcccattcgagccgtccgggagcgaaggcgcccttcggccagtctggt
tttaaggccggaggcgctcaggctaaaagcggctctcaggctaaaggtggaagcccatca
aaaacgggtggcaaatctgcaggaaagccctctcagggtcgccaacaggctaagtaa
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