Shewanella oncorhynchi: RA178_20725
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Entry
RA178_20725 CDS
T09381
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_20725 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_20725 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_20725 (trpS)
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
RA178_20725 (trpS)
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class I (G)
RA178_20725 (trpS)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_20725 (trpS)
Prokaryotic type
RA178_20725 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WMB72796
UniProt:
A0AA50KED9
LinkDB
All DBs
Position
complement(4703520..4704518)
Genome browser
AA seq
332 aa
AA seq
DB search
MTKPIVLSGAQPSGELTIGNYMGALRQWVAMQDSHDCLYCVVDLHAITVRQDPKALREAC
LDTLALYLACGVDPKKSTVFIQSQVPQHTQLGWALNCYTQMGELSRMTQFKDKSQKHANN
INVGLFGYPVLMAADILIYQANEIPVGQDQKQHLELTRDIATRFNNAYGDTFTIPEPFIP
ELGAKVMSLQEPLKKMSKSDDNRNNVIGLLEDPKSVLKKLKKAMTDSDEPPVVRFDVDNK
PGVSNLLSLMSGVTGQSIASLEAEFEGKMYGHLKGAAGEAVVSMLEPLQERYRAIRSDRA
YLDQVMKAGAQSAQARAEVTLKKVYEKIGLLV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacccatagtactcagcggtgcacagccgtccggcgaattaaccataggtaac
tacatgggtgcattgcgtcaatgggttgcgatgcaagatagccacgactgcctgtattgt
gtagttgatttgcatgccattactgtgcgccaagatcctaaagcgttgcgcgaagcgtgt
ttagataccttagccctgtatttggcctgtggcgtcgatcctaaaaagagtacagtgttt
atccagtcacaggtgccacaacatacgcaattgggttgggcattaaactgctatacccaa
atgggtgagttgagccgcatgactcagtttaaagataaatcacaaaagcacgccaacaac
atcaacgtgggtttatttggctacccagtgttgatggcggcggatattctgatttatcaa
gcgaacgaaatccccgttggccaagatcagaagcaacaccttgagttaacgcgtgatatc
gctactcgctttaacaatgcctatggtgatactttcaccattcctgagccgtttattcct
gaacttggcgctaaagtcatgtcgctgcaggagccgctaaagaagatgtctaagtcagac
gataaccgtaataacgttatcggcctgctagaagatccgaaatcagtgctgaagaagctg
aaaaaagccatgacagacagtgatgagccgccagtcgtgcgttttgatgtggataataaa
ccgggtgtttctaacctgctgagtctcatgtcgggtgtgacagggcaaagcattgcgagc
ctagaagccgagtttgaaggcaagatgtatggtcatttgaaaggtgcagcaggtgaagcg
gttgtgagcatgttagagccactgcaagagcgttaccgcgcgattcgtagcgatcgcgct
tacttagaccaagtgatgaaagctggtgcacagagtgcgcaggcgcgcgccgaagtgacc
ctgaagaaagtgtatgagaagattggtttgttagtgtaa
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