Shewanella oncorhynchi: RA178_20735
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Entry
RA178_20735 CDS
T09381
Symbol
rpe
Name
(GenBank) ribulose-phosphate 3-epimerase
KO
K01783
ribulose-phosphate 3-epimerase [EC:
5.1.3.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00030
Pentose phosphate pathway
sog00040
Pentose and glucuronate interconversions
sog00710
Carbon fixation by Calvin cycle
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
sog01230
Biosynthesis of amino acids
Module
sog_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
sog_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RA178_20735 (rpe)
00040 Pentose and glucuronate interconversions
RA178_20735 (rpe)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RA178_20735 (rpe)
Enzymes [BR:
sog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.1 ribulose-phosphate 3-epimerase
RA178_20735 (rpe)
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GFIT
Motif
Pfam:
Ribul_P_3_epim
QRPTase_C
OMPdecase
His_biosynth
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
WMB72798
UniProt:
A0AA50KDC1
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Position
complement(4705267..4705941)
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AA seq
224 aa
AA seq
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MRPFLIAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNYG
ITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNPA
TPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGGV
KVDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDEMRAELAKVGA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccattcttgattgctccatcaattttatctgccgattttgcccgtttgggtgac
gatgtaaaagctgtgttagatgcgggaaccgacgtagtacattttgatgtgatggataat
cactatgttcctaacttaacgattggccctatggtgtgccaagcactgcgtaactatggg
attaccgctgatattgatgtgcatttgatggttaagccagttgatcgtatcgtgcctgat
tttgctaaagcgggcgcgtctattattactttccacccagaagcttctgagcacgtcgat
cgcacacttcagctcatcaaagagtgcggttgtaaggcaggtctcgtgtttaatcctgcg
acaccactgcattatcttgaccatgtgatggataagctcgacgtgatcctattgatgtca
gtgaatcctggttttggtggtcaatcctttattccatcaaccttagataagctgcgccaa
gtgcgtgcgcgtattgatgccagtggttttgatattcgcttagaagtcgatggcggcgtt
aaggtcgacaatatcgccgaaatcgcggccgccggtgcggacatgtttgttgcgggctcg
gctattttcggcaagcccgattataaggccgttgttgatgagatgcgtgccgaacttgct
aaagttggggcatag
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