Shewanella oncorhynchi: RA178_20770
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Entry
RA178_20770 CDS
T09381
Name
(GenBank) type IV pilus secretin PilQ family protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sog02044
]
RA178_20770
02035 Bacterial motility proteins [BR:
sog02035
]
RA178_20770
Secretion system [BR:
sog02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RA178_20770
Bacterial motility proteins [BR:
sog02035
]
Pilus system
Pilus assembly proteins
RA178_20770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
Secretin_N
AMIN
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
WMB72805
UniProt:
A0AA50Q6G2
LinkDB
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Position
complement(4710948..4712999)
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AA seq
683 aa
AA seq
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MKSSAAIKVPLISSGLIKSVIGIALVFGILPSSYAANRLMDVKYHALVDHQLELELVFEE
AVTPPVIDSNASPAELVLTFDNSISGLSKDRLPINQVGVTDMMTEQQDTRLKVTLGMSKV
KPYQGSVMGNSYRLTINDEVAGAQTQAENPFVNSIKNIDFRRNENGGGELLVYLNNRSVA
VNVEQVGAKLEVKLYNTDINSDLLYVMDVKDFSTPVKSFETFKEDLTTRILVDIAGEYEF
SYKQEDNLFRLSMNKVERVAAKKDVKKYNGRTLSLNFQNIPVRTVLQIIADYNNFNLVTS
DTVEGNITLRLDDVPWDQALDLILQTKGLDKRIEGNILMVAPSEELAIRESQNLKNRQEV
KELAPLYSEYLQINYAKAIDIAELLKSADSSLLSPRGSVAVDERTNTVLVKDTAETIENI
HRLVEVLDIPIRQVLIESRMVTVKDDVSEDLGIRWGVTDQQGSKGTSGTLEGAQSIANGI
IPTPDQRLNVNLPAAVTNPTSIAFHVAKLADGTILDLELSALEQENKGEIIASPRITTSN
QKAAYIEQGVEIPYVQSTSSGATSVTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKT
VDTPTGPAVAIDTQRIGTQVLVDNGETIVLGGIYQQNLISRVSKVPILGDIPLVGFLFRN
TTDKNERQELLIFVTPKIVGEKI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttctgccgcgataaaagtcccgttaatttcttcaggcttaatcaagtctgtt
attgggatcgcattggtatttggaattttgccatcgagttatgctgcaaaccgattaatg
gatgttaagtaccatgccttggttgaccaccagttagagctagagttggtatttgaagaa
gcggtcactccgccagttattgactctaatgcctcgcctgcagagctcgtattaaccttt
gataatagtatttctggtttatctaaggatcgcttacccattaatcaagtcggtgtaact
gacatgatgactgagcagcaagatactcgtcttaaagtcaccttaggtatgtccaaagtg
aaaccttaccaaggttcagtcatgggcaactcatatcgactcactattaatgatgaggtt
gcaggcgctcagactcaggcagaaaatcccttcgttaacagcattaaaaatatcgatttt
cgtcgtaatgaaaatggtggcggtgagttattagtctatttgaataaccgctcggttgcc
gttaacgttgagcaagtgggcgctaaactcgaagttaagttatataacactgatattaat
agtgatctgctttatgttatggatgtgaaagatttttcaacaccagtaaaaagcttcgag
acatttaaagaagatctaacaacgcgcattttagttgatattgctggggaatatgagttc
agttacaagcaagaggataatctctttagactctcgatgaataaagttgagagagttgcc
gccaagaaagatgttaaaaaatacaatggccgtactttgtcgcttaactttcaaaatatc
cctgtacgtactgttttgcagatcattgctgactataacaattttaacttagtcacgagt
gatactgttgaaggcaacatcaccttgagattggatgatgtgccctgggaccaagcatta
gatttgattctacaaaccaaaggcctagataagcgtatcgaaggcaacatcttaatggtg
gcaccgagcgaagagttggctattcgtgaaagccaaaatctcaaaaataggcaagaagtt
aaagagctagcacctttgtattctgagtacttgcaaattaactatgccaaagcgatcgat
attgctgagctgcttaaaagcgcagattctagtttactctcgccacgcggctcagtcgcg
gtcgatgaacgtaccaacactgtacttgtgaaagatacggcagaaacgattgagaacatc
catcgtttagtcgaagtactcgatatccctattcgccaagtgctgatcgagtcacgtatg
gtaacagtcaaagatgatgtctctgaagacttaggcatacgttggggcgtaacggatcag
cagggcagtaagggaacctctggtacattagaaggtgctcagagtattgccaacggcatc
attccaactcctgaccagcgtttgaacgttaatttgcctgcggcagtgaccaatccaaca
agtatcgcattccacgttgctaagttggcagatggtactattcttgatttggaattgagt
gcgttagagcaagaaaataaaggtgaaattatcgccagccctcgtattactacctctaac
caaaaggcggcttatattgagcagggtgtggagatcccttatgtgcagtcgacttcaagt
ggtgcaacctcggtcacttttaagaaagccgtgttgtccttgcgtgttactccacaaatt
acacctgataaccgcgttattttagatttggaaatcacccaagactctcagggcaagacg
gttgacacaccaacgggtcccgcagtcgccatcgatacccaacgtattggcactcaagtg
ctagttgataacggtgaaaccatagtccttggtggtatttatcagcaaaacttgatcagc
cgggtgagtaaagtccctattctcggtgacattcccttagtcggtttcctgtttaggaac
acaacagacaaaaatgagcgtcaagagctacttattttcgtaacccccaaaatagtcggt
gagaagatctaa
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