Shewanella oncorhynchi: RA178_20955 Help Entry RA178_20955       CDS       T09381                                  Name (GenBank) ligand-gated channel protein   KO K16089   outer membrane receptor for ferrienterochelin and colicins Organism sog  Shewanella oncorhynchi Brite KEGG Orthology (KO) [BR:sog00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:sog02000]     RA178_20955 Transporters [BR:sog02000]  Other transporters   Pores ion channels [TC:1]    RA178_20955 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TonB_dep_Rec_b-barrel Plug OMP_b-brl_3 MtrB_PioB DUF2490 OMP_b-brl Motif Other DBs NCBI-ProteinID:  WMB72835 UniProt:  A0AA50Q6H2 LinkDB All DBs Position complement(4759640..4761640) Genome browser AA seq 666 aa AA seqDB search MLLSRKKYLAQVITALCLLPTVPVTNALADTASDKEKMMERIVVTASGFEQQIRDAPASI SVITREDLDNRFYRDLTDAMLEVPGVVITGGADRQDISLRGMGSQYTLILVDGKRQSSRE TRTNSDGPGVEGAWTPPLAAIDRIEIVRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVR LDSTLQEKSDSGNVYQGNFFVNGGLIKDLLGMQLYGQYTQREEDQIYGGYRGRDATNLTA RFALTPNENHDIMFEVGTSNQELDSSLGKTVTPLAPGEACGRRGCPESSTTEYENSTFSL SHTGRWDFGTSDSYIKHEVFDNKTRKMKITNTDAQSSLITTLGQSHTATFGAAFNHQDLT DETGNQVSDLTDISRKQWSVFSEDEWRIVDNFALTMGLRLDDDENFGNHVSPRVYGVWGL TDSTTLKGGVSTGFRAPSLRQTVPDWGQVSRGGNMYGNPDLQPETSVNYELGLYSDLTES ITASAGVFYNEFNDKITRVACPATQCTDGPNQFGSNPTTYVNVDEAVTQGIELSIDYRIR SNLSLTGNYTYTDSEQKTGVYKGSPLNQLPKHLIQASFNYEPIDNLSTWLRVNYRGEESQ PTTGPSSSSLIAPSYTLLDLGANYQLNDSLKFSAGIYNAFDKEITQEEYGYIEDGRRYWL GMTYSF NT seq 2001 nt NT seq  +upstreamnt  +downstreamnt atgttgttaagtcgtaagaagtacctcgctcaagtgatcaccgctttatgtttgttgccc acagtacctgtgacaaatgcccttgcggataccgcgtcagataaagaaaagatgatggaa agaatcgtggtgactgcatcgggatttgaacagcaaattcgcgatgcgccagcttctatc agcgtgatcacccgtgaggatctggataaccgcttctaccgcgacttaaccgatgccatg ttagaagtgcccggcgtggtgattacgggcggtgcagaccgtcaggatatcagtctgcgg ggcatgggtagccaatacacgttaattttagtggatggtaaacgccaatcctcgcgcgag acacggaccaacagtgacggcccaggcgttgaaggcgcttggacgccaccattggctgct atcgatagaattgagatcgttcgtgggcctatgtcgtcactttatggttcggatgccatt ggtggggtaattaacattatcactcgcaaagtgccaaacgagtggcagggtgaggtgcga ctcgacagcactttgcaggaaaaatctgactcgggaaatgtgtatcaaggcaactttttc gtcaacggtggtttgatcaaagatctgctagggatgcaactttatggtcaatatacccag cgtgaagaagatcaaatctatggtggttaccgaggtcgcgatgcgactaacttgaccgcg agatttgcgctcacacccaatgaaaatcacgatatcatgtttgaagttggtacttctaac caagaactcgacagcagtttaggtaaaaccgtcacaccgttagcaccgggcgaagcctgt ggtcgtcgcggttgccctgaatcttcaacgacagaatatgaaaacagcaccttctccctt tcacatacaggtcgttgggactttggtacttcggatagctatatcaagcatgaagtgttt gataataaaacccgtaagatgaaaatcactaacacggatgcgcaatctagccttatcact acgttaggccaaagtcatacagcgacctttggtgcagcattcaatcatcaagatctcacc gacgaaacaggtaaccaagtgagtgacttaactgatattagtcgcaaacaatggtcggtg ttttctgaggatgaatggcgcattgtcgataactttgctctgaccatggggctgcgtttg gatgatgatgaaaactttggtaatcatgtcagtccgcgcgtttatggcgtgtggggatta accgacagcaccaccttaaagggcggtgtatcaacagggtttagggcgccgagtttacgc cagacagtgcccgactggggacaagttagccgcggtggcaacatgtacggtaatccagat ttacaacctgaaacttcagttaactatgagttaggtttgtattctgatctgaccgagagc attaccgctagcgcgggtgtgttctataacgagtttaatgacaagatcacccgtgtagct tgtcctgcgactcaatgtaccgatggtccaaatcaatttggttctaatccgacgacttat gtgaacgtcgacgaagctgtgacccaagggattgaactgagtatcgactatcgcattcgc tcgaacttgagtttgacaggtaactatacctatacggattcggagcaaaagacaggtgtt tataaaggtagcccattgaatcaattgcctaagcatttgatccaagcgtctttcaactac gagcctattgataatttaagcacttggttgagggtgaactaccgtggcgaagagagccaa ccgacgacaggaccttcatcgagcagtttaatcgccccttcttatactctgctggatttg ggggctaactaccagttgaacgatagcctgaaatttagtgcgggcatttataacgccttc gataaggaaattacccaagaagaatacggttatatcgaagatggccgccgttactggtta ggtatgacctatagtttttaa

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