Shewanella oncorhynchi: RA178_21220
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Entry
RA178_21220 CDS
T09381
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_21220 (rsmD)
Enzymes [BR:
sog01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
RA178_21220 (rsmD)
Ribosome biogenesis [BR:
sog03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RA178_21220 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
N6-adenineMlase
RsmJ
TRM
Motif
Other DBs
NCBI-ProteinID:
WMB72888
LinkDB
All DBs
Position
4822350..4823018
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AA seq
222 aa
AA seq
DB search
MVNHRTVKNNVTKGQTAKNKPGSGQVRIIAGQWRSRRLPIQDLEGLRPTTDRVRETLFNW
LANDLVNARVLDCFGGSGALALEALSRYASFAKIIELQRGAALQLKENLQTLKCDKAEVL
NADTLVVLQRGCEQGFDVVFIDPPFRKGLAEKTIQLLDSQGWLNDGALIYVEIESELPQL
AIPSRWHALKEKNAGQVSYRLYQYHSETTVEPIEDENHALID
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttggttaatcatcgaacggtcaaaaataatgtgaccaagggtcaaacagccaaaaataaa
cccggcagtggacaagtgcggatcatcgcaggccaatggcgctcgcgtcgtctacctatc
caagatctcgaaggtttacgcccaacgacagacagggttcgcgaaacactctttaactgg
ctggctaatgatttagtcaatgcacgtgtactcgactgttttggcggtagcggcgcttta
gctctcgaagccttgtcccgctatgccagtttcgccaaaattatcgagttgcaacgcggc
gcagccctgcaattaaaagaaaatctgcaaacccttaaatgcgataaggccgaagtgctc
aatgctgatacgttagtggtactgcaaaggggctgcgagcaaggtttcgatgtggtattt
atcgatcccccctttcgtaagggattggcagaaaagacgattcaactgctagattctcaa
ggttggcttaatgatggtgcgctgatttatgttgaaatcgagtctgaattgccgcaactt
gctatcccttcgcgctggcacgccttaaaagaaaagaatgcagggcaagtgagctaccgt
ttatatcaatatcactcagaaaccactgttgagcccatcgaagatgaaaaccatgccctt
attgattaa
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