Shewanella oncorhynchi: RA178_21350
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Entry
RA178_21350 CDS
T09381
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_21350
Transporters [BR:
sog02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
RA178_21350
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GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
WMB72913
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Position
4850862..4852229
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AA seq
455 aa
AA seq
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MNTAKSTWLDLMLNGAKNRQLLALALPMILSNITIPLLGLVDTAVIGHLSEAYYLGGVAV
GSTIITLIIWLLGFLRMATTGLVAQAFGADDLHAQHKLLVQGAMLAMLLGAGVIALQVPI
LNLALGLSEASSEVERYCREYFQVRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLILANL
ANIILDVVFVLGLGWGVKGAALASVFADITAFSVALTMVLQQLKRAPEFHLSHLFPHVTL
TGYGKLLRLNTDIFVRSLCLQAAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIA
YYAEAEVGRAYGQKQAEQLREAVILAWCWSAITALGFCAVFSLFGSNIIALLTSINEVRA
TAQTYLIWLIFLPLWSFSSYLFDGVYIGAAKGKVMRNSMILATFGAFFPTWYLLQQLLLP
EQGNHALWAAMSVFMIVRSLTLAGHYYFSQAFLHK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgctaaatcaacttggctcgacctcatgctcaacggcgcgaaaaatcgccag
ttactagcgctcgccctgccgatgatactctccaatatcactatcccgctgttgggctta
gtcgatacggctgttataggtcatctgagtgaggcctattatttagggggagtcgctgtc
gggtcaacgattatcacattaatcatttggttattgggatttttgcgtatggcgacgaca
ggtttagtcgcgcaagcctttggtgctgacgatcttcacgcccagcacaaactcttagtc
caaggcgctatgctagcgatgttattgggcgcaggcgttatcgcactgcaagtcccgata
ttgaatttagcgttaggattatccgaagcgagtagcgaggtcgaacgttattgccgcgag
tattttcaggtacggatttggtcaacgcccttcgccctgctcaatttagtgatgttaggt
tggctcttagggcgacaacaacctaaagccgccatgtggcagctgattttagccaacctt
gccaatattatcctcgatgtggtgtttgtcctcggtttgggttggggcgttaaaggcgct
gccctcgcctcagtatttgccgatatcaccgctttctcagtcgcactcactatggtgtta
caacaactcaagcgtgcaccagagtttcacttatcccacctattcccccatgtcaccctg
actggttatggcaaattactgaggctcaacacagatatttttgtccgtagcctctgcttg
caggcagcttttgcctttatgacattccatggtgcaggtctaggtgataataccgttgcg
gccaatgccgtgttattgaatttactgctattaatctcctacgctctagatggtatagcc
tattatgccgaggcagaagtcggtcgagcctatgggcaaaaacaggcagaacaattaagg
gaagctgtgatcttagcttggtgctggtcggccataacggcactaggattctgcgctgta
tttagtctttttggcagtaatattatcgcgttattgaccagtattaatgaggtcagagcc
actgcgcaaacctatcttatctggttaatattcttgcctttatggtcctttagctcgtat
ttattcgatggtgtttacataggtgccgctaaaggaaaagtgatgcgcaatagcatgata
ctcgccacctttggcgcgtttttcccaacatggtatttactgcagcagctattactacca
gagcaaggcaaccatgccctctgggccgcgatgagtgtctttatgatcgtcagaagccta
acgctcgcagggcattattatttcagtcaggcctttttacataaataa
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