Shewanella oncorhynchi: RA178_21750
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Entry
RA178_21750 CDS
T09381
Name
(GenBank) HD-GYP domain-containing protein
KO
K25135
cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RA178_21750
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Paralog
GFIT
Motif
Pfam:
HD_5
DUF3391
HD
KOW_HD_C
HDOD
STAG_C
Motif
Other DBs
NCBI-ProteinID:
WMB72990
UniProt:
A0AA50KCU6
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Position
complement(4948245..4949435)
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AA seq
396 aa
AA seq
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MSESAESVELIKLPVSQLTLGMFVSAIDKNDKGQLAIANAGQIKHKDAILKLAKSGIKFV
WVDAERSAEHCGLKKKITNDNQTDNKKALISRDKQQAQAKVMLTEAKDLIRKVLSETFEG
KAIEVAPFEALADTMIESVMLDADALKCMSALRSKDAYLLEHSVNVAFLLVTFGKYLKLD
RVMLREMAVGGILHDIGKIKVDNKVLHKPGKLTPEEFEHMKLHQVYALEIMNETTGLSQI
SKDICLMHHEKLDGRGYPRGLKGDEIPRHGRMSCIVDIFDALTATRCYKEAMSPAAAFKI
LLSLTPFHLDQELVYEFIRCIGVYPVGSLVELSDGRVGIVWASKDRDALHPIVKCFYSLK
VKRYTDVAMVDLLKSELYIERGVSPSTLDIDPTPFY
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcggcagaatcagttgaacttatcaaattaccagtgtcacagctgacattg
ggtatgtttgtcagtgccatagacaaaaatgataaaggtcaacttgctattgcaaatgca
ggacaaattaaacacaaggatgcgattttaaagttagctaaaagtggtattaaatttgtt
tgggtagacgctgaacgttcggctgaacattgtgggttaaagaaaaaaatcactaacgat
aatcaaaccgacaataaaaaagcactcattagccgcgataagcaacaagctcaagctaaa
gtcatgcttaccgaggcgaaagacctcattcgtaaagtcttatctgagaccttcgaaggt
aaagccatcgaagttgcccccttcgaagcgttagccgataccatgatagagtcagtgatg
ttggatgctgatgcgcttaaatgtatgtctgcactccgttcaaaagatgcctatctactt
gaacattcagtgaatgtcgcctttctactggttacctttggtaaatacttaaagctagat
cgcgtcatgctacgggaaatggcggtcggcgggattttgcacgatattggcaagattaaa
gtcgacaataaagtgctgcacaagccgggcaaactgacgccggaagaatttgaacatatg
aagttgcatcaagtgtatgcgcttgaaattatgaacgaaactactggtctgtcgcagatc
agtaaagatatctgcttaatgcaccatgaaaaattagatggcagaggttatccaaggggt
ttgaagggtgatgaaatcccccgccatggccgtatgagttgtatagtcgatatcttcgat
gctttaacagcaacgcgatgttataaagaggcgatgagccctgccgcggcctttaaaatt
ttactcagtctgacgccattccatttggatcaagaattggtctatgagtttattcgttgt
attggtgtttaccctgtgggttccttagttgaattatcggatggtcgtgttggtattgtt
tgggcctcgaaagatagggatgcgctacatccaatcgtaaagtgtttttattctttaaaa
gtaaaacgttacactgatgtcgctatggtggatttattaaaatctgaactttatattgaa
cgcggtgtgtcaccgagtacattagatatcgatccgactcctttctattaa
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