Shewanella oncorhynchi: RA178_21780
Help
Entry
RA178_21780 CDS
T09381
Name
(GenBank) cache domain-containing protein
KO
K02482
two-component system, NtrC family, sensor kinase [EC:
2.7.13.3
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sog01001
]
RA178_21780
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sog02022
]
RA178_21780
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RA178_21780
Protein kinases [BR:
sog01001
]
Histidine kinases
NtrC family
RA178_21780
Two-component system [BR:
sog02022
]
NtrC family
Unclassified
RA178_21780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_3_3
HATPase_c
Cache_3-Cache_2
HisKA
HAMP
DUF2630
Gp-FAR-1
Sec10_N
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
WMB72996
UniProt:
A0AA50Q6A6
LinkDB
All DBs
Position
complement(4955511..4957664)
Genome browser
AA seq
717 aa
AA seq
DB search
MSFFTHFFGVSWQQMQAKVRYRILILTLLPILLTLVSLVFITIYWNISYTGKQLFMKVKA
DLSVAENTLQQVQVRQEKQLERVVTSWTFQNDFRPLFSGKELSGEVSYRASIDAFLLEQK
KQLNLDYLRLVSVAEAAADPDLRQILPKLDGLLPYSGLMVLPPERLARIDPELAITASIP
IVATLRAQSPVKTVEERGLLSRSLLPVPDMEGKVAWYLDGGILFNRDTRIVDHIRDLVYD
KGTLPERSIGTVTIFLDNIRISTNVPLHFYPTGNETLGRALGSLVSEEVKDKVLTQGEQW
VDRAFVFNDWFISAYAPLEDVRGQRVGMIYTGFSESPFIHNYLLNIIELGTILMLVLLVS
GLLVYRGAYSLLQPIERIHHVVQAVQSGRNIRIGALGLDRDNELSNLAEQFDSMLDLLQR
RNAQIQAAAEQLEMKVEERTRSLQDKTLELQRNVALLNETRQQLVTNEKLTALGELTAGI
AHEINNPTAVILGNMELLRYELGDNAEVVKEEIDLVIQQVGRISTIIRSLLQYSRPGEFN
APLEMHPMTPIIEEMLVLVRHSIQKQEVVLITELNASCPVQVNRPQLLQVLINLVVNAAH
AMDGKGRIWVRTYDWVQQDMPIGVKIEVEDEGSGIAPEQLGRIFDPFYTTRKDGTGLGLS
LSYGIIKRIGGTIEVSSTLGKGSLFTIGLYHEAKEDQQNNPYDGLHFAGNYSDMSAD
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgtcattcttcactcacttttttggtgtcagttggcagcaaatgcaggccaaggtgcgc
tatcgcatattaatcctgacgttactgcccattctactgacactggtgagtttagtgttt
atcactatttactggaacatcagttatacaggtaagcagctgtttatgaaggttaaagct
gacttgtctgttgccgaaaacactttgcagcaagtgcaagtacgccaagaaaaacaactt
gaacgtgtggtgacgtcttggacctttcaaaatgactttaggccacttttcagtggtaaa
gaattaagtggcgaagtcagctaccgagccagtattgatgcttttctccttgaacagaaa
aaacagctaaatctcgattatctgcgtttagtcagtgttgccgaagcggccgcagaccca
gatttacgccaaatccttcctaagttagacggtttattaccttactccggcttgatggtg
ctgccgcccgagcgtttagcacgtatcgaccccgaattggctatcactgcgagcattccg
atagttgcaaccttgcgggcgcagagccccgttaaaaccgttgaagaacgtggtttattg
agccgtagcctattgcccgtccctgatatggaaggcaaagtggcttggtatctcgatggt
gggatcttgtttaatcgcgatactcgaattgtcgaccacattcgcgatctggtatacgac
aaaggcaccttgcccgagcgttccatcggtactgtgaccatcttcttagataacatccgt
atttccaccaacgtgccgctgcatttttatcccacaggcaatgagacgctgggccgcgcg
cttggcagtttagtgtcggaggaagtgaaagacaaagtgttaactcaaggcgagcagtgg
gtcgatcgcgctttcgtatttaacgattggtttatttccgcttatgcccccttggaagat
gttcgcggccaacgtgtcggtatgatctataccggcttttctgaatcgccatttatccat
aattatttactcaatatcatagagctaggcacgattctaatgttagtgctgttggtctct
ggcctgctggtttatcgcggtgcttatagtttattgcagcccattgaacgtattcaccat
gttgtacaagcagtgcagtcggggcgcaatattcgtatcggcgccttaggattagatagg
gataatgagttatcgaacttagccgagcaatttgacagtatgcttgacttgctacagcgt
cgaaatgcccaaattcaagcggcggcagaacagcttgaaatgaaggttgaagagcgtact
cgtagcctgcaggataaaaccttagagctgcaacgtaacgtggcattactaaacgaaacg
cgtcaacagctcgtcactaacgagaagctcactgctcttggcgaattgaccgcaggtatc
gcccatgaaatcaataatccgactgccgtaattcttggcaatatggagttactgcgctac
gaacttggtgataatgctgaagtagtaaaagaagaaattgatctagtcattcaacaggtt
gggcggatcagcactatcatccgcagcctgttgcaatacagccgacctggcgaattcaac
gcgccactagaaatgcatccgatgactcctattatcgaagaaatgttggtgttggtgcga
cattcgattcagaaacaagaagtcgtgctgatcactgagttaaacgccagttgtcctgta
caggttaatcgtccgcagttgctgcaagtcttgattaatcttgtagtgaatgcggcgcat
gcgatggacggtaaaggacgtatttgggtgcgaacctatgactgggtgcagcaagatatg
ccgattggcgtcaaaatcgaagtggaagatgaaggctcagggatagcgccagagcagctt
ggacggattttcgaccctttttataccacacgtaaggatggcactggtttaggtctttcg
cttagttacggcattatcaagcggattggtggcacgatagaagtgagttcaactttgggt
aaagggtctttatttaccataggtttgtatcatgaagcgaaggaagatcagcaaaataat
ccctacgatggcttacactttgcgggcaattacagcgatatgtctgcagattag
DBGET
integrated database retrieval system
