KEGG T09381: RA178

Shewanella oncorhynchi: RA178_21870

Entry

RA178_21870       CDS       T09381

Symbol

waaA

Name

(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase

K02527

3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]

Organism

sog Shewanella oncorhynchi

Pathway

sog00540

Lipopolysaccharide biosynthesis

sog01100

Metabolic pathways

Module

sog_M00060

KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type

Brite

KEGG Orthology (KO) [BR:sog00001]
09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    RA178_21870 (waaA)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:sog01005]
    RA178_21870 (waaA)
Enzymes [BR:sog01000]
2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.12  lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     RA178_21870 (waaA)
    2.4.99.13  (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     RA178_21870 (waaA)
    2.4.99.14  (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
     RA178_21870 (waaA)
    2.4.99.15  (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
     RA178_21870 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:sog01005]
Lipid A
  RA178_21870 (waaA)

SSDB

Motif

Pfam:

Glycos_transf_N Glyco_trans_4_4 Glycos_transf_1 Epimerase_2

Other DBs

NCBI-ProteinID:

WMB73014

UniProt:

A0AA50Q3C4

LinkDB

Position

complement(4975663..4976928)

AA seq 421 aa
MNRFFYSTILYLLSPLLVVYLAFRAIKSPDYRGRWGERFGLTRLKSTDLLVHSVSMGETL
AAIPLIRLIMQSHPELSITVTTTSPTGSAEVRKAFGDSVQHCYLPFDLPWCVGRFLRQVS
PKSCIIMETELWPNLVALAAKRGVRLMLANARLSAKSAAQYAKRPKLSRPMLQRLDIIAV
QTQVEAQRFIELGVSPDRVTVCGSLKFDLSITPERLANAKLLRQTWGRETSPIWVAGSVH
PGEFDAMLTAHRQLLAQWPDALLIIAPRHPEQFSAVAEFVASQGFESVRRSGNFPVAATT
QVLVGDTMGELLTFYGAADQAFVGGTLITNGGHNPLEPVAMGVPVMVGPNHWDFAQITQM
LADAGGLKVVASADELAANLIEYFAKPELRLQAVNAGLAVVEANRGALQRQFTLVQYLIK
S

NT seq 1266 nt +upstreamnt +downstreamnt
atgaatcgttttttctattccacgatcttatatttattatcccctttgctagtcgtctat
ttagcatttcgtgctattaaaagccctgattaccgcggtcgttggggggagcgttttgga
ttaactcgacttaaatcgacggatttactggtccattctgtgtctatgggtgaaacgctt
gcggcaatcccattgatccgtttgattatgcaatcacaccctgaattaagcattacggtt
accacaaccagcccaacagggtctgccgaagtgcgtaaagcctttggtgactcagtgcaa
cattgttatttaccctttgacttaccttggtgtgtggggcgtttcttgcgccaagtctca
cctaaatcttgcatcattatggaaaccgaactgtggcctaatttggttgccttagcggcc
aagcgaggtgtgcgcttgatgttggccaatgcacgtctgtcggccaagtcggcggcgcaa
tatgctaagcgccctaaactcagtcgacctatgttgcaacgactcgatattattgcggtg
cagactcaagtagaagcgcagcgttttatcgagttaggtgtatcgccagatagagtgaca
gtatgcggtagcttgaagtttgatctcagtattacgcctgagcgtttagccaatgccaag
ctgttgcgtcagacttgggggcgtgaaacctcgccgatttgggtcgcaggcagtgtgcat
cctggagaatttgacgccatgcttacagcccataggcaattattggctcagtggccagat
gctttgctgattattgcaccgcgtcatcctgagcagttttctgccgttgctgagtttgtt
gccagccaaggttttgaatctgttcgccgcagcggtaattttcctgtggcggccacgact
caagtgctagtgggcgataccatgggtgaacttctgaccttttatggcgcggcggatcaa
gcctttgtcggtggtacgctgatcactaacggtggtcataatcccttggagcctgttgct
atgggcgtgcctgttatggtgggaccgaaccattgggattttgctcaaattacgcagatg
ttggcggatgctggtgggttaaaggttgtcgcatcggcggatgaacttgccgctaacttg
attgagtattttgctaaacctgagttacgcctgcaggcggtgaacgcgggattggctgtg
gttgaggcaaatcgcggtgccttgcaacgacaatttactttagtgcaatatttaataaag
tcttaa

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