Shewanella oncorhynchi: RA178_22010
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Entry
RA178_22010 CDS
T09381
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_22010
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_22010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WMB73039
UniProt:
A0AA50KDR1
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All DBs
Position
complement(5011814..5013934)
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AA seq
706 aa
AA seq
DB search
MVFKYSVIGLAVGSALMAMPVIAEVASDKNIERINVTGRTFNDYKVGSASGAMRGDIDLM
DTPQSVNVIPDFVTDEQLATNLAEVLVNDSSVTAGTTRWNRQVFSIRGFELDSGNGYLIN
GHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLDLGFDTDGL
GSTRAQLDAGGSLNDAQSLRYRGVLVKQDTKYWREYSANDENQERDRWLGYLNLEFDVSD
DVLLSVKYDHTQDKAGIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWQMS
DDWKVKVGYNDQQFNRQRLDSAPSLIEGSEDPFKDGYNIKPFDRYDDWQHKTAYVDFTGE
FSLAGMEHQFLIGANYLDYFYQQQIQKGKSQPVIPGQPIIQQDLDYHQGKLSNPSEYKYY
GFYLQDLMTLNEQWKLLAGVRYDEQKKDGEGENSYAVSPKFGVIYSPMSNGSIYVNYSKS
FTPQGSVTSSEDVNHGDNLKPEYGTQYELGTKWELFDDSLLLTAALFDITVSNVTIEQDI
PETSDGNKTITTQGGEQHHRGFEVGAQGQLGDSWFVTSSMMYLDAEYKTGAGKIDGKILD
GKTPIDAPEWSANIWTRYEVTDNFAMNFGAIYVGERFADKDNSITKDGYVRFDIGAAYTM
DIMGKDVSIRANVRNLFDTEYLDGGSDKMVTIGQDRNFSVAVEAKF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtatttaaatattcagttataggtttagctgtaggctcggcattaatggctatgccg
gttattgcagaagtggcgagcgataaaaatattgagcgcatcaatgtgactggccgtact
tttaacgactataaagtcggtagtgcatcgggtgccatgcgtggcgatatcgacttaatg
gatactccacagtcagttaatgttatccctgattttgtgactgatgaacagttggccact
aaccttgccgaggttttagttaacgactccagtgtgacggcgggaaccacgcgctggaac
cgtcaagtcttcagtatccgcggcttcgagctcgattcgggtaacggttatcttatcaat
ggccatcaacaatggtctcactacgtacaaccaattgaaactttacagcaagtcgaagta
ttgaaaggtccttcgagcatgttgtacggccaatctggccctggtggtttagtgaatatg
gtcactaagaaaccgacctatgattcaatgctcgatttaggttttgatactgatggtttg
ggttcgacccgtgctcagctagatgcgggcggcagtttaaatgatgctcagagtcttcgt
taccgcggcgtgttagtgaagcaagacacaaaatactggcgtgagtattccgctaacgat
gagaaccaagagcgtgaccgttggttgggctacttaaacttagaatttgatgtcagtgat
gatgttctgttatcggttaagtacgatcatacccaagataaagcaggcattgatgcgggt
gggtggttagataaacaaggtaatgttatcggtgaacgtaaaaccgtatgggatgcacct
tgggcctttaccgataacacagtctctaacttaggtgccgatctaacttggcagatgagt
gatgattggaaagtcaaagttggttataacgatcagcagtttaatcgccaacgtttagac
tctgcgccaagtttgattgaaggctctgaagatccattcaaagatggttataacatcaaa
ccattcgaccgttacgacgattggcagcataaaacggcctatgtcgatttcacgggtgaa
ttttctttggcaggaatggagcatcaattccttattggagctaactatttagactatttc
tatcagcagcaaattcagaaaggcaaaagtcagcccgtaattcctgggcaaccaattatt
cagcaagatcttgattatcaccaaggtaagctaagcaacccaagtgaatacaagtattac
ggtttctatttacaggatttgatgacgcttaatgagcaatggaaattgcttgctggtgtg
cgttacgacgaacagaagaaagatggtgaaggtgaaaacagctatgcagtgtcgcctaag
tttggagtgatctactcacctatgagtaatggcagtatttatgttaactattcaaagagt
ttcacaccacaaggctcggtaaccagttctgaagatgtcaatcatggagataacctgaaa
cctgagtacggtactcaatatgaactagggactaagtgggagttgtttgatgacagccta
ctgttaacagcagccctgtttgatattacggtttctaatgtcaccatagagcaagatatt
cccgaaacgagtgatggcaataaaactattactactcaaggtggtgagcagcatcaccgc
ggctttgaagttggtgcccaaggtcagttaggtgatagctggtttgtgacttcttctatg
atgtatttagatgcggaatataaaacgggtgctggcaagatcgatgggaaaatcttagat
ggtaaaacacccatcgatgcgcctgagtggtcggcgaatatctggactcgttatgaagta
actgacaactttgcgatgaactttggtgctatttatgtgggtgaacgcttcgccgataaa
gataacagcattaccaaagacggttatgtgcgttttgatataggtgcagcctatactatg
gatatcatgggtaaagatgtcagtattcgtgccaacgtcagaaacctctttgatactgaa
tatttagatggtggcagtgataagatggtgacgattggccaagatcgtaacttcagtgtt
gcagttgaagctaagttctaa
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