KEGG   Sulfurisphaera ohwakuensis: D1869_00555
Entry
D1869_00555       CDS       T06310                                 
Name
(GenBank) CDC48 family AAA ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
soh  Sulfurisphaera ohwakuensis
Pathway
soh04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:soh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    D1869_00555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soh03019]
    D1869_00555
   03009 Ribosome biogenesis [BR:soh03009]
    D1869_00555
   04131 Membrane trafficking [BR:soh04131]
    D1869_00555
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:soh04147]
    D1869_00555
Messenger RNA biogenesis [BR:soh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     D1869_00555
Ribosome biogenesis [BR:soh03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    D1869_00555
Membrane trafficking [BR:soh04131]
 SNARE
  SNARE associated proteins
   Others
    D1869_00555
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    D1869_00555
Exosome [BR:soh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   D1869_00555
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N CDC48_2 RuvB_N AAA_16 AAA_2 AAA_5 AAA_22 AAA_14 TIP49 AAA_33 nSTAND3 IstB_IS21 AAA_lid_PRS2_C AAA_28 AAA_17 Mg_chelatase AAA_18 RNA_helicase AAA_24 Vps4_C ATPase_2 ABC_tran DUF815 NPHP3_N AAA_3 TsaE Zeta_toxin AAA_7 Parvo_NS1 ATP-synt_ab NACHT NB-ARC AAA_25 Bac_DnaA PhoH
Other DBs
NCBI-ProteinID: QGR15846
UniProt: A0A650CDQ1
LinkDB
Position
81880..84201
AA seq 773 aa
MEIELSTGAEIPPSGKKELILRVVEAKQKDVGRGKVRVDIDLLNQIGVNPGEVIEIEGQR
KTAAIAWPLSPEDALEEEDKFIIRMDGITRKNAGVSIGDKVIVRKASPKIATSVKLAPSN
FSITVDPGFISYVKKKLKDYPLVEGDTVLIPVLGQAIPFTVVQVRPQGIVIVSDETSITI
SEKPAEQARYPRVTYEDIGGMKHIIQKIRELVELPLKHPELFKRLGIEPPKGILLYGPPG
VGKTLLAKAVANETEAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDA
IAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIE
IPLPDKQGRLEILQIHTRNMPLSKDVDLEKLAEMTHGYTGADLSALVREAAMNALRRYLQ
VIDLNQDKIPPEILEKMEVNMDDFLKAFKEIVPSGLREIYVEVPEVHWSDIGGLEDVKEE
LREVVEYPLKYREAYENVGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEIL
SKWVGESEKAIREIFRKARQAAPTVIFFDEIDAIAPMRGLTTDSGVTERIVNQLLAEMDG
IEKLENVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDI
TLDELAEKTEGYTGADLAALVREATLRAIREEMSECMKKADENCKRNDNECRDRIVKDCM
KGKGVLVEKRHFEIALKKVRPSVTMDMIQFYQNWLEKARQQLPRANLKPSTFT
NT seq 2322 nt   +upstreamnt  +downstreamnt
ttggagatagagttgagtactggcgctgaaattcctccttctggtaagaaagagcttata
ttgagagtagttgaagctaaacaaaaagatgtaggaagaggaaaagttagagtagacatt
gatttattaaaccaaataggcgttaatcctggagaagtaattgaaattgaaggacaaaga
aagaccgccgcaatagcttggcctttatcaccagaagatgcccttgaagaagaagacaaa
ttcataattagaatggatgggataacaaggaaaaacgcgggtgtttctataggagacaaa
gttatagtaagaaaagcctcaccaaaaatagcaactagcgtaaaactagctccttcgaat
ttttcaattactgttgatccagggtttatatcttatgtaaagaaaaaacttaaagattac
cctctagttgaaggagatactgttcttattccagtactaggtcaagctataccttttaca
gtagttcaggttagacctcaaggaatagtgattgtttcagatgagacaagtataacaata
tctgaaaaaccagcagaacaagctagatatcctagggttacttatgaggacattggcgga
atgaagcatataatacagaaaataagagagcttgtagaattaccactgaaacacccagaa
ttattcaagagattaggaattgaaccacctaaaggaattttactatatggtcctcctgga
gtaggtaaaaccctattagctaaagcagtagctaatgaaacagaagcttactttacatct
attaatggaccggaaattatgagcaaattctatggtgagagcgaacaaagactaagagaa
atttttgaagatgcaaagaaacacgcaccagctataatatttattgatgaaatagacgca
atagcacctaaaagagatgaagtaataggtgaagttgaaagaagagttgttgcacaacta
ttaacattaatggacggtctcgagagtagaggtaatgtaatagttattgcagctacaaat
agacctaatgccgttgaccccgcgctaagaagaccaggaagatttgatagagaaatagaa
ataccattaccagacaagcagggtagattagaaatattacaaattcacactagaaatatg
ccgttatccaaggatgtagacctagaaaaattagctgaaatgacccatggatatactggt
gcagatctttctgctttagttagagaagctgcaatgaatgcattaagaagatatctacaa
gtaattgatttgaaccaggataaaataccaccagaaatactcgaaaaaatggaagtaaat
atggatgacttcttaaaggcatttaaagaaatcgtaccaagcggtttaagagaaatctat
gtagaagtacccgaagttcattggagcgatattggaggactagaggatgtaaaagaagaa
ttaagagaagtagtagaatatccactaaaatacagagaagcttatgagaatgttggaata
gaaccgcctaagggtattttgttgtttggtcctcctggtactggtaagactatgcttgct
aaggctgttgctactgagagtggtgctaattttattgctgttcgtggtcctgaaatctta
tcaaagtgggttggtgagagtgagaaggctattagggaaatatttaggaaggctaggcaa
gcagcaccaacagtaatattctttgatgaaatagacgcaatagcaccaatgagaggacta
acaacagacagtggcgtaacagaaagaatagtaaaccaactactagcagaaatggacgga
attgaaaaacttgagaatgtggttattattgctgctactaataggcctgatattcttgat
cctgctttgttgaggcctggtaggtttgataggttgatttatgttcctccaccagataag
agggctagggctgagattttgaaagttcatactaggaatgtaccattagctgaagatatt
acattagatgagctagctgaaaaaacagaaggctacacaggagctgatttagctgcacta
gttagagaagccacattaagagcaataagagaagaaatgagtgaatgtatgaaaaaagct
gatgaaaactgtaaaagaaatgataatgaatgtagagatagaattgtgaaggactgcatg
aaaggaaaaggagttctagtcgagaaaaggcattttgagatcgcattaaagaaagtgaga
ccatcagtaactatggacatgatacagttctaccagaactggttagaaaaagcaaggcaa
caactaccaagagctaatttgaagcctagtaccttcacgtga

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