Sulfurisphaera ohwakuensis: D1869_00555
Help
Entry
D1869_00555 CDS
T06310
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
soh
Sulfurisphaera ohwakuensis
Pathway
soh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
D1869_00555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soh03019
]
D1869_00555
03009 Ribosome biogenesis [BR:
soh03009
]
D1869_00555
04131 Membrane trafficking [BR:
soh04131
]
D1869_00555
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soh04147
]
D1869_00555
Messenger RNA biogenesis [BR:
soh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
D1869_00555
Ribosome biogenesis [BR:
soh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
D1869_00555
Membrane trafficking [BR:
soh04131
]
SNARE
SNARE associated proteins
Others
D1869_00555
Autophagy
Aggrephagy
Other aggrephagy associated proteins
D1869_00555
Exosome [BR:
soh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D1869_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
AAA_33
nSTAND3
IstB_IS21
AAA_lid_PRS2_C
AAA_28
AAA_17
Mg_chelatase
AAA_18
RNA_helicase
AAA_24
Vps4_C
ATPase_2
ABC_tran
DUF815
NPHP3_N
AAA_3
TsaE
Zeta_toxin
AAA_7
Parvo_NS1
ATP-synt_ab
NACHT
NB-ARC
AAA_25
Bac_DnaA
PhoH
Motif
Other DBs
NCBI-ProteinID:
QGR15846
UniProt:
A0A650CDQ1
LinkDB
All DBs
Position
81880..84201
Genome browser
AA seq
773 aa
AA seq
DB search
MEIELSTGAEIPPSGKKELILRVVEAKQKDVGRGKVRVDIDLLNQIGVNPGEVIEIEGQR
KTAAIAWPLSPEDALEEEDKFIIRMDGITRKNAGVSIGDKVIVRKASPKIATSVKLAPSN
FSITVDPGFISYVKKKLKDYPLVEGDTVLIPVLGQAIPFTVVQVRPQGIVIVSDETSITI
SEKPAEQARYPRVTYEDIGGMKHIIQKIRELVELPLKHPELFKRLGIEPPKGILLYGPPG
VGKTLLAKAVANETEAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDA
IAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIE
IPLPDKQGRLEILQIHTRNMPLSKDVDLEKLAEMTHGYTGADLSALVREAAMNALRRYLQ
VIDLNQDKIPPEILEKMEVNMDDFLKAFKEIVPSGLREIYVEVPEVHWSDIGGLEDVKEE
LREVVEYPLKYREAYENVGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEIL
SKWVGESEKAIREIFRKARQAAPTVIFFDEIDAIAPMRGLTTDSGVTERIVNQLLAEMDG
IEKLENVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDI
TLDELAEKTEGYTGADLAALVREATLRAIREEMSECMKKADENCKRNDNECRDRIVKDCM
KGKGVLVEKRHFEIALKKVRPSVTMDMIQFYQNWLEKARQQLPRANLKPSTFT
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggagatagagttgagtactggcgctgaaattcctccttctggtaagaaagagcttata
ttgagagtagttgaagctaaacaaaaagatgtaggaagaggaaaagttagagtagacatt
gatttattaaaccaaataggcgttaatcctggagaagtaattgaaattgaaggacaaaga
aagaccgccgcaatagcttggcctttatcaccagaagatgcccttgaagaagaagacaaa
ttcataattagaatggatgggataacaaggaaaaacgcgggtgtttctataggagacaaa
gttatagtaagaaaagcctcaccaaaaatagcaactagcgtaaaactagctccttcgaat
ttttcaattactgttgatccagggtttatatcttatgtaaagaaaaaacttaaagattac
cctctagttgaaggagatactgttcttattccagtactaggtcaagctataccttttaca
gtagttcaggttagacctcaaggaatagtgattgtttcagatgagacaagtataacaata
tctgaaaaaccagcagaacaagctagatatcctagggttacttatgaggacattggcgga
atgaagcatataatacagaaaataagagagcttgtagaattaccactgaaacacccagaa
ttattcaagagattaggaattgaaccacctaaaggaattttactatatggtcctcctgga
gtaggtaaaaccctattagctaaagcagtagctaatgaaacagaagcttactttacatct
attaatggaccggaaattatgagcaaattctatggtgagagcgaacaaagactaagagaa
atttttgaagatgcaaagaaacacgcaccagctataatatttattgatgaaatagacgca
atagcacctaaaagagatgaagtaataggtgaagttgaaagaagagttgttgcacaacta
ttaacattaatggacggtctcgagagtagaggtaatgtaatagttattgcagctacaaat
agacctaatgccgttgaccccgcgctaagaagaccaggaagatttgatagagaaatagaa
ataccattaccagacaagcagggtagattagaaatattacaaattcacactagaaatatg
ccgttatccaaggatgtagacctagaaaaattagctgaaatgacccatggatatactggt
gcagatctttctgctttagttagagaagctgcaatgaatgcattaagaagatatctacaa
gtaattgatttgaaccaggataaaataccaccagaaatactcgaaaaaatggaagtaaat
atggatgacttcttaaaggcatttaaagaaatcgtaccaagcggtttaagagaaatctat
gtagaagtacccgaagttcattggagcgatattggaggactagaggatgtaaaagaagaa
ttaagagaagtagtagaatatccactaaaatacagagaagcttatgagaatgttggaata
gaaccgcctaagggtattttgttgtttggtcctcctggtactggtaagactatgcttgct
aaggctgttgctactgagagtggtgctaattttattgctgttcgtggtcctgaaatctta
tcaaagtgggttggtgagagtgagaaggctattagggaaatatttaggaaggctaggcaa
gcagcaccaacagtaatattctttgatgaaatagacgcaatagcaccaatgagaggacta
acaacagacagtggcgtaacagaaagaatagtaaaccaactactagcagaaatggacgga
attgaaaaacttgagaatgtggttattattgctgctactaataggcctgatattcttgat
cctgctttgttgaggcctggtaggtttgataggttgatttatgttcctccaccagataag
agggctagggctgagattttgaaagttcatactaggaatgtaccattagctgaagatatt
acattagatgagctagctgaaaaaacagaaggctacacaggagctgatttagctgcacta
gttagagaagccacattaagagcaataagagaagaaatgagtgaatgtatgaaaaaagct
gatgaaaactgtaaaagaaatgataatgaatgtagagatagaattgtgaaggactgcatg
aaaggaaaaggagttctagtcgagaaaaggcattttgagatcgcattaaagaaagtgaga
ccatcagtaactatggacatgatacagttctaccagaactggttagaaaaagcaaggcaa
caactaccaagagctaatttgaagcctagtaccttcacgtga
DBGET
integrated database retrieval system