KEGG   Sulfurisphaera ohwakuensis: D1869_01280
Entry
D1869_01280       CDS       T06310                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
soh  Sulfurisphaera ohwakuensis
Pathway
soh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:soh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    D1869_01280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soh03021]
    D1869_01280
Transcription machinery [BR:soh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     D1869_01280
 Prokaryotic type
  Archaeal type
    TFE
     D1869_01280
SSDB
Motif
Pfam: TFIIE_alpha WHD_RecQ_mid_bact WSLR Zn_ribbon_CLPX_N HTH_9 DNA_ligase_ZBD TrmB DnaD_N Zn_ribbon_IS1595 WHD_F93 HTH_11 IF2_N zf-Mss51 Zn_ribbon_TFIIB DUF7838 Zn_ribbon_LysW Zn_ribbon_3 Zn_Ribbon_TF DUF7342
Other DBs
NCBI-ProteinID: QGR15969
UniProt: A0A650CDW3
LinkDB
Position
202354..202890
AA seq 178 aa
MSSRAEELILSLAKDLVGEDATELLKFLLRKRIEMTDDDIAKELNVKVNEIRKKLYLLSE
QGFITYRKTRDKETGLFIYYWKVNLDQINELLLNRKRLVLEKLKARYEQEKDSLYYYCPQ
DNIQYNFDEALENEFKCPKCGSPLEYYDSEKTKKFLEYKIKQIENEIERETRHGSNSR
NT seq 537 nt   +upstreamnt  +downstreamnt
atgagtagtagggcagaagaattgatacttagcctggcaaaggatctagttggtgaagat
gcaacagaattattaaagtttctcttaagaaagagaattgaaatgacagatgatgatata
gcgaaagagcttaatgtaaaagtaaacgaaattaggaaaaagttatatttactttctgag
caaggttttataacctatcgtaaaacaagagataaagaaacgggtttatttatatattac
tggaaagtaaacctagatcagataaatgaattattacttaacagaaaaagattagtacta
gaaaaattaaaagcgagatatgagcaagagaaagattctttatattattattgtcctcaa
gataatattcaatataattttgatgaagcattagagaatgaatttaaatgtccaaaatgt
ggatcaccactagaatattacgactcagagaaaactaaaaaattcttagagtataagata
aagcaaattgaaaacgaaatagaaagagagacacggcatggctccaatagtcgttga

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