Sulfurisphaera ohwakuensis: D1869_01605
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Entry
D1869_01605 CDS
T06310
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
soh
Sulfurisphaera ohwakuensis
Pathway
soh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
D1869_01605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soh03019
]
D1869_01605
03009 Ribosome biogenesis [BR:
soh03009
]
D1869_01605
04131 Membrane trafficking [BR:
soh04131
]
D1869_01605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soh04147
]
D1869_01605
Messenger RNA biogenesis [BR:
soh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
D1869_01605
Ribosome biogenesis [BR:
soh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
D1869_01605
Membrane trafficking [BR:
soh04131
]
SNARE
SNARE associated proteins
Others
D1869_01605
Autophagy
Aggrephagy
Other aggrephagy associated proteins
D1869_01605
Exosome [BR:
soh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D1869_01605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
Vps4_C
AAA_33
AAA_28
AAA_18
nSTAND3
RNA_helicase
IstB_IS21
Mg_chelatase
AAA_lid_PRS2_C
NPHP3_N
ABC_tran
TsaE
AAA_24
AAA_3
Parvo_NS1
ATPase_2
AAA_25
AAA_17
Zeta_toxin
DUF5906
DUF815
AAA_7
ATPase
AFG1_ATPase
PhoH
Molydop_binding
ATP-synt_ab
Lipoprotein_7
Motif
Other DBs
NCBI-ProteinID:
QGR16023
UniProt:
A0A650CDT7
LinkDB
All DBs
Position
254169..256412
Genome browser
AA seq
747 aa
AA seq
DB search
MSQEVSLRVSEARQRDVGKKIARLSDYTMRRLGIETGDYIEIIGPNGSALAQAMPSYDIS
DDEIKIDGYIRKSIGVGIGDDVKVKKANVTPATKITLAPTQPIRFDRSFVEYVKDQLMNK
PLAKGETIPVPIYTGTLDFIVINTQPSNYVYVTESTNLEIREEPAKESELGGYPKVTWED
IGDLEEAKQKIREIVEWPLRHPELFQRLGIEPPKGILLYGPPGNGKTLLARALANEVGAS
FYTINGPEIMSKFYGESEQRLREIFEEAQKNAPAIIFIDEIDSIAPKREEVTGEVEKRVV
AQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDTKGRKEILQVHT
RNMPLAEDVDLDKLAEITYGYTGADLAALAKEAAMNALRRFIAEKKINLEQERIPAEILK
ELKVTMQDFLEAMKSIQPTLLREVYVEVPKVHWNDIGGLEEVKQQLREAVEWPLRFSELF
NRSGITPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIF
RKARQAAPTVIFFDEIDAIAPMRGLTTDSGVTERIVNQLLAEMDGIVPLNKVVVIAATNR
PDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDITLDELAEKTEGYTGA
DIEALVREATINAMRKIFNDCDKKAKDQCQSNVDCYNSKMRDCMNNAKVVVTKEDFNKAL
EVVKPSLTAADIQRYERLAKELKRSVL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaggtcagtctaagagtaagtgaagctagacaaagagacgtaggaaaaaag
attgcaagattatcggattatacaatgagaagacttgggattgaaactggagattatatt
gagataataggtccaaatggttctgccttagctcaggctatgccttcttatgatatttct
gatgatgaaataaaaattgatggatatattaggaaatctatcggagtagggattggtgat
gatgtaaaagtaaagaaagctaatgtaactccagcaactaagataactcttgctcctaca
caaccaataagatttgatagaagtttcgtagaatatgtaaaagaccaactaatgaataaa
ccgttggcaaagggagaaacaataccagtcccaatttacactggtacattagatttcata
gtaataaatactcaaccttcaaattatgtatatgttacagagtcgacaaaccttgaaata
agagaggaaccagctaaagaaagtgaattaggtggatatcctaaagtaacgtgggaagat
ataggtgatttagaagaggctaaacaaaaaatcagggaaatagttgaatggcctctaagg
catcctgaattattccaaagattagggattgaaccacctaaaggaattttactttacggc
ccccccgggaatggtaaaaccttacttgctagggcgttagctaatgaggttggagctagt
ttttacacaattaatggcccagaaattatgagtaaattttacggtgagagcgagcaaaga
ttaagagaaatttttgaagaggcacagaaaaatgctccagctataatatttattgatgag
atagattctattgcacctaaaagagaggaagttactggcgaagttgagaagagagttgta
gcacaattattaacattaatggacgggattaaaggtagaggaaaagtaatagtaataggt
gctacaaatagaccagatgcggtagatccagcactaagaagaccaggaagatttgatagg
gaaatagaaattagacccccagatactaaaggaagaaaggaaatcctacaagtacataca
agaaatatgccattagcagaagatgtagatctagataaacttgcagaaattacatatgga
tatactggagcagatttagcagcactagcaaaagaagctgctatgaatgctttaagaaga
tttatagctgagaagaaaataaaccttgaacaagaaagaattcctgctgaaattttaaag
gaactgaaagttactatgcaagatttcttagaagctatgaaatcgatacaaccaactcta
cttagagaagtttatgttgaagttccaaaggttcattggaacgatatcggaggtcttgag
gaggttaaacaacagcttagggaagcagttgagtggcctttaagattctcagaattattt
aatagaagtggaataactccgcctaagggtattttgttgtttggtcctcctggtactggt
aagactatgcttgctaaggctgttgctactgagagtggtgctaattttattgctgttcgt
ggtcctgaaatcttatcaaagtgggttggtgagagtgagaaggctattagggaaatattt
aggaaggctaggcaagcagcaccaacagtaatattctttgatgaaatagacgcaatagca
ccaatgagaggactaacaacagacagtggcgtaacagaaagaatagtaaaccaactacta
gcagaaatggacggaattgtaccactaaataaggttgtcgttattgctgctactaatagg
cctgatattcttgatcctgctttgttgaggcctggtaggtttgataggttgatttatgtt
cctccaccagataagagggctagggctgagattttgaaagttcatactaggaatgtacca
ttagctgaagatattacattagatgagctagctgaaaaaacagaaggctacactggtgca
gatatcgaagctttagtaagagaagctacaattaatgctatgagaaagatattcaatgat
tgtgacaagaaagcaaaagatcaatgtcagagtaatgttgattgttataatagtaaaatg
agagattgtatgaataatgcaaaagttgttgtaacaaaagaagattttaataaagcttta
gaggtagttaagccaagtttaacagcagctgatatacaaagatatgaaagactagcaaaa
gaattgaagaggtcagtattatga
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