Sulfurisphaera ohwakuensis: D1869_02005
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Entry
D1869_02005 CDS
T06310
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
soh
Sulfurisphaera ohwakuensis
Pathway
soh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1869_02005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soh03019
]
D1869_02005
Messenger RNA biogenesis [BR:
soh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
D1869_02005
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
D1869_02005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QGR16097
UniProt:
A0A650CEW6
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All DBs
Position
complement(312333..313064)
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AA seq
243 aa
AA seq
DB search
MIQLQKPRLILDNGLRLDGRRPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKE
MHPRHLALPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVELFPRT
VIDVFMEVLQADAGTRLVSLMAASMALADAGIPMRDLIAGVAVGKADGVLVLDLNEPEDM
WGEADMPVAMMPSLKQVALLQLNGNMTPQEFRQALEMAQKGIETIYNLEKEAIRSKYAEL
KEE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctacaaaaaccgaggctaatacttgataatggactacgattagacggtaga
aggccagatgaaatgagacctataaagatagaattgggcgttttgaagaatgctgacggc
tcagcaatattcgaaatgggaaatacaaaagttattgcagcagtttatggcccaaaagaa
atgcatcctagacatttagctttgccagatagagccgtattaagagttagataccatatg
actcctttctctactgatgaaagaaaaaatcctgctcctagtcgaagagaaatagaactg
tctaaagtaataagggaagcattagaatcaacaatcttagtagaattatttccaagaact
gttatagatgtattcatggaagttttacaagcagatgcaggaacaagattagtttcttta
atggctgcatctatggctttggctgatgcaggaattcctatgagagacttaatagctggt
gtagcagtaggaaaagcggatggagttttagtattagatttaaacgagccagaagatatg
tggggagaagctgatatgccagtagctatgatgccgtcacttaagcaagttgcgttactt
caactaaatggaaatatgacacctcaagagtttagacaagcattagagatggctcaaaaa
ggaattgaaacaatatataatttagaaaaagaagccattaggagcaaatatgcagaatta
aaggaggaataa
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