Sulfurisphaera ohwakuensis: D1869_07080
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Entry
D1869_07080 CDS
T06310
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
soh
Sulfurisphaera ohwakuensis
Brite
KEGG Orthology (KO) [BR:
soh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soh03032
]
D1869_07080
03400 DNA repair and recombination proteins [BR:
soh03400
]
D1869_07080
Enzymes [BR:
soh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1869_07080
DNA replication proteins [BR:
soh03032
]
Prokaryotic type
DNA Topoisomerases
D1869_07080
DNA repair and recombination proteins [BR:
soh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1869_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
QGR16963
UniProt:
A0A650CGQ2
LinkDB
All DBs
Position
complement(1267932..1269926)
Genome browser
AA seq
664 aa
AA seq
DB search
MNCYPKNYILVIAEKSKAAKKIAEALSDKPTTCKKYSVSYWVINYKGKVNVVAPAAGHLF
NLYGDSSFPIFSMDWKPLWEIDDSAKYTKKYYNLLKDLSKYAIEYINACDYDIEGSVIGY
MIIKHFGDLKKAKRMKFSALTKQDIQKAYSNLSPLDYNMINAGIARHKVDWIWGINVSRA
LMLAVSSVTKKRVTLSAGRVQSPTLIHVVENEIARELYIPLPVYRVSVKIKIGNETFSLS
LNRTFEYKEEAQEFANKIKKSRAVVDEVRIEEKSLTRPSPFNLGDLQAEAGRILGYSPYY
VERLAEELYLDGLISYPRTNSQKIPPSVDVKSIVNGLEANFKNLVGLVRNITKGEYIVRQ
GSKDDPAHPAIYPTGNRITEKLGIRQYKLFELITRRFLASISRDAIMITQKIIIRFKDVD
ISDEITRQKIKFKGWLLLYPYHSVKDEELLDVKEGEEVKIESVSVKMDLAKPDVKRYNKV
QLLKWMETSNLGTEATRGKIIETLFNRKYLSQKRGTIYPTSLGIVIVEVLKDYFKDLTSI
ELTSKMEEKLNEILDGKETVEGVVAETINTLKIYLDNYNKYKDQIGIKLAKILGLMKYKK
CKFCDLEAEYDNLCKYHYNAYMKLKETLKVWKERTKLEDKDILKKIYSSKTTGKYIKDII
SEMM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaattgttatcctaaaaattatatcttagttattgcagaaaaaagtaaagctgcaaag
aaaatagctgaggctttatcagataaaccaactacatgtaaaaaatactcagtaagctat
tgggttataaattataaaggaaaagtaaacgttgttgcacctgctgctggtcatttattt
aatctttatggtgatagttcttttcctattttttccatggattggaaacctctttgggaa
atagatgattctgctaaatatacaaaaaagtactataatttgcttaaggatttatcaaaa
tatgccattgaatatattaatgcttgtgattatgatattgaaggttctgtaataggttat
atgataatcaaacattttggtgatttaaaaaaagctaaaagaatgaaattttcagcgtta
actaaacaagacatacagaaagcatattcaaatctttcaccattagactacaatatgata
aatgcaggtattgctaggcataaagtagattggatatggggtattaatgtaagtagggcc
ttaatgttagctgtaagttctgttacaaagaaaagggtaacattaagtgcggggagggta
caaagtcctactctaatccatgtagtagaaaatgagatagcaagagaactatatattcca
ttgcctgtatatagagttagtgtaaaaattaaaataggaaatgagacatttagcttgtcg
ttaaatagaacgttcgaatacaaggaagaagctcaagaatttgctaataaaataaaaaaa
tcaagggctgtagtggatgaggtcagaatagaggaaaaatcattaacacgaccttcacct
tttaatttaggagatttgcaagcagaagctggcagaatattaggttattcaccttattat
gtcgaaagattagctgaagaattatacttagatgggttaattagctatcctagaacaaat
agtcaaaaaattcctccatcagttgatgtaaaaagtatagtcaatggattagaagccaat
tttaagaacttagtagggttagtgagaaacattacgaaaggagaatacatagtcagacaa
ggaagtaaagatgatcccgctcatcctgcaatttaccctactggaaatagaataactgaa
aaacttgggattagacaatataagttgtttgaactaataactaggcgttttcttgcaagc
atttcaagagatgctataatgataactcagaaaataatcatacggtttaaggatgtggat
atatctgatgagataactaggcaaaaaataaagtttaaaggatggttattactatacccc
tatcattctgtgaaagatgaggaattattagatgtaaaagaaggagaagaggttaagata
gaatctgtttctgtaaagatggacttggctaaaccggatgtaaaaagatacaacaaagtt
caattattaaaatggatggaaacttccaacttaggaactgaggctacaagaggaaaaatt
attgaaaccttatttaatagaaaatatctttcacaaaaaagaggtacaatatatcctaca
tcgctaggaattgttatagttgaggtgttgaaagattattttaaggacttaacaagcata
gaattaacttcaaagatggaagaaaaattaaacgaaatactagatgggaaagagacagta
gaaggagttgtcgcagaaacaataaatactctgaagatctatctagataattataataaa
tataaagatcaaataggaattaaattagctaaaatattaggattaatgaagtataagaaa
tgtaagttctgtgaccttgaggcagaatatgataatttatgtaaatatcactataatgca
tatatgaaattgaaagaaacacttaaggtatggaaagagagaactaaattagaagataaa
gatatattgaaaaaaatttatagttcgaaaactacgggaaaatatataaaggacataatt
tcagagatgatgtga
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