Streptococcus cristatus: I872_00710
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Entry
I872_00710 CDS
T02649
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
soi
Streptococcus cristatus
Pathway
soi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I872_00710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soi03021
]
I872_00710
03400 DNA repair and recombination proteins [BR:
soi03400
]
I872_00710
Enzymes [BR:
soi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I872_00710
Transcription machinery [BR:
soi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I872_00710
DNA repair and recombination proteins [BR:
soi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I872_00710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGK70277
LinkDB
All DBs
Position
139153..142797
Genome browser
AA seq
1214 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKETPLEHKSIMTEREYRERLREYGAGSFVAKMGAEAIQDLL
KQVDLETEIAALKEELKTASGQKRIKAIRRLDVLDAFYRSGNKPEWMILNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDYAQNVKAAKRMVERGDERIWDVLEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMALRNGYVHLHTRVGI
ATDSLNKPWTEDQKHKILMTTVGKILFNDIMPEELPYLQEPTNANLTEGVPAKYFLEPGK
DIKSAIEALELNIPFKKKNLGNIIAEIFKRFRTTETSALLDRLKDLGYHHSTLAGLTVGI
ADIPVVEDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLVANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLITSITEGKEMIESLE
ERLNGRYTKKTVKHPETGAVIIGPNELITEDKAREIVNAGVEEVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDASTRTKKVFVKGATGEGEYVVPFTARMKVEVGDQV
SRGAALTEGSIQPKHLLAVRDVLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDITDFTDANRDVVISGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIDEVV
ETAETEEVETSVES
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
gtggttgatgtaaatcgatttaaaagtatgcaaatcaccctagcttctccaagtaaggtc
cgttcatggtcttacggggaagtgaagaaacctgagacaatcaattaccggaccttgaag
ccagaacgtgaaggtctctttgacgaggtgatcttcgggccaaccaaggattgggagtgt
gcctgcggtaaatacaaacggattcgttataaagggattatttgtgaccgctgtggtgtc
gaagtaacacggaccaaggttcgccgtgaacgtatgggccacattgagctcaaagcacca
gtttctcatatctggtatttcaagggaatcccaagccgaatgggcttgactctggatatg
agtccgcgcgccttggaagaagtcatttattttgcggcttatgtggtgattgatcctaag
gaaacaccactggagcataagtctatcatgacagagcgtgagtaccgcgagcgtctccgt
gaatatggtgcaggttcattcgttgctaaaatgggagcagaagcgatccaagacttgttg
aaacaagtggatttggaaacagaaattgcggctctcaaggaagaattgaaaacagcttct
ggtcaaaaacgaatcaaggctattcgtcgattggacgttttggatgccttctaccgctct
ggcaataagccagaatggatgattctcaacatcctgccggtcattccaccagatctacgt
ccaatgctccaattggacggtggccgctttgcctcatctgacttgaacgacctttaccgt
cgtgttatcaaccggaacaaccgtttggctcgtttgcttgagttgaatgcaccaggtatc
atcgttcaaaatgagaaacggatgctgcaagaagcggtggatgctttgattgataacggt
cgccgtggtcgtccgatcacaggtccaggtagccgtccactcaaatctttgagccacatg
ctcaaaggtaaacaaggtcgcttccgtcaaaacttgctgggtaaacgggttgacttctca
ggacgttccgttatcgccgttggtccgacattgaaaatgtatcaatgtggtgtgccacgc
gagatggccatcgagctcttcaagccatttgtcatgcgggaaattgttgcccgtgattat
gcacagaatgtgaaagctgctaagcgcatggtagagcgtggcgatgagcgcatctgggat
gtcttggaagatgttatcaaagaacacccagtgctccttaatcgcgcaccgacccttcac
cgtttgggtatccaagcctttgagccagttttgattgacggtaaagctcttcgcttgcac
ccattggtctgtgaagcctacaatgccgactttgacggtgaccaaatggccatccacgtt
ccattgtctgaagaagcacaggctgaagctcgtatcctcatgctggctgctgagcacatc
ttgaatccgaaagacggaaaaccggttgtaacaccatctcaggatatggtcttgggtaac
tactacctgaccatggaagaagcaggtcgcgaaggcgaaggtatggtctttaaagaccgt
gatgaagccgtgatggccttgcgtaatggctatgtccacttgcacactcgtgtgggtatc
gcgacagatagcctcaacaaaccttggacagaagatcaaaaacacaagatcctcatgaca
acagtaggtaagattctctttaacgacatcatgccagaagagctgccttacctgcaagag
ccgacaaatgctaacttgacagaaggcgttccagctaaatacttcttggaaccaggaaaa
gacatcaaatctgctattgaagctctagagttaaatattccgttcaagaagaaaaatcta
ggaaatatcatcgctgaaatcttcaaacgcttccgcaccacagaaacatctgccctcctg
gaccgcttgaaagacctaggttaccaccattctactctggctggtttgacagtgggtatt
gcggatattccagtcgtggaagacaaggcagagatcatcgaagaatctcacaagcgtgta
gaacaaatcaccaagcaattccgtcgtggtatgattaccgacgatgaacgctacaacgca
gttactgctgaatggcgtgctgcccgtgaaaaattggaaaaacgtttggttgccaaccaa
gatccgaagaacccaatcgttatgatgatggactctggagcccgtggtaacatctcaaac
ttctcacagcttgccggtatgcgtggtctgatggctgctccaaacggacgtatcatggag
ttgccaatcttgtctaacttccgtgaaggtttgtccgttctggaaatgttcttctcaact
cacggtgctcgtaaaggtatgaccgatacagcccttaagactgccgactcaggttacctg
actcgtcgtctggttgacgttgctcaagatgtgattatccgtgaggacgactgtggtaca
gaccgcggcttgctcatcacttctatcacagaaggcaaggaaatgattgagtctctggaa
gagcgtctcaatggtcgttacactaagaagacggttaaacatccagaaacgggtgctgtc
attattggtccaaatgaattgatcaccgaagacaaggcgcgtgagattgttaatgctggt
gttgaagaagtgacgattcgctctgtctttacatgtaacacccgtcatggtgtctgccgt
cactgttacggtatcaacttggcgactggtgatgcagttgaagtcggtgaagcagtcgga
accatcgctgcccaatctatcggggagcctggtacacagctgaccatgcgtaccttccac
acgggtggtgttgcctcaaataccgatattactcagggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatccgaaaggggaagcggtcatcacagaagtcaagggtgaagttact
gctatcgaagaagatgcatctactcgtactaagaaagtctttgtcaaaggtgcaactggt
gaaggtgaatatgtagtgccatttacagcccgcatgaaggtggaagtgggcgaccaagtc
tctcgcggtgctgccttgaccgaagggtctatccaacctaagcacttgctggctgtccgt
gatgtcttgtctgttgaaacttacctgcttgctgaggtacaaaaagtttaccgtagccaa
ggggtagaaatcggcgacaaacacattgaggtaatggttcgtcaaatgattcgcaaggta
cgtgtcatggatccaggagatacagatctcctcatgggaactctcatggatatcactgac
tttacagatgctaaccgtgatgtggttatctcaggcggagtgcctgcgacagcccgtcca
gttctcatgggaatcaccaaagcttcccttgagacaaatagcttcctgtctgcagcttcc
ttccaggaaacaactcgtgttctgacagatgctgctatccgtggtaagaaagaccatctc
cttggcctcaaggaaaatgttatcatcggtaagattatcccagccggtactggtatggct
cgttaccgtaacttggaaccacaagcaatcaatgaagttgaaattattgacgaagttgtg
gaaacagcagagactgaagaagtcgaaacaagcgtagaatcataa
DBGET
integrated database retrieval system
