Streptococcus cristatus: I872_06335
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Entry
I872_06335 CDS
T02649
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
soi
Streptococcus cristatus
Brite
KEGG Orthology (KO) [BR:
soi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soi03019
]
I872_06335
03009 Ribosome biogenesis [BR:
soi03009
]
I872_06335
Enzymes [BR:
soi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I872_06335
Messenger RNA biogenesis [BR:
soi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I872_06335
Ribosome biogenesis [BR:
soi03009
]
Prokaryotic type
rRNA helicases
I872_06335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGK71353
LinkDB
All DBs
Position
complement(1275486..1276829)
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AA seq
447 aa
AA seq
DB search
MKFTEFNFKDYIQEALKDLNFVEATEVQEKLIPVVLSGRDLVGESKTGSGKTHTFLLPIF
QELDEEADSVQAVITAPSRELATQIYQAARQLASFSEQEIRVANYVGGTDKARQIGKLES
SQPHIVIGTPGRIYDLVESGDLAIHKAHTFVVDEADMTLDMGFLETVDRIAARLPKDLQF
LVFSATIPQKLQPFLKKYLSNPVMEQIKTKTVIADTIDNWLLSTKGRDKNAQIYEISQLL
QPYLAMIFVNTKTRADELQAYLTAQGLKVAKIHGDIPPRERKRIMNQVKNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL
GIKFTPKMIKNGEFQDTYDRDRRANREKTKEKLDTEMIGLVKKKKKKIKPGYKKKIQWAV
NEKRRKTKRAENRARGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagaatttaactttaaagattatatccaggaagcccttaaggacctaaac
tttgtggaggcgacagaggttcaagaaaagctgattccagtggtgttgtctggccgagac
ttggtcggggagtccaaaacaggatcaggcaagacgcataccttcttgctgcctatcttc
caagagctggacgaagaggctgacagtgtccaagcagtgattacagcacccagccgagaa
ttagcaacccagatctatcaggctgcccgtcagctagctagcttttctgagcaagagatt
cgggtggccaactatgtcggcggaactgacaaggctcgtcagattggcaagctagagtcc
agccagccccatatcgtcattggaacgccggggcggatttacgatttggttgagtcaggt
gatttggctatccacaaggctcatacctttgtcgtggacgaggctgatatgacgcttgat
atgggctttttggagacggtagaccggattgcggctcgcttgcctaaagacttgcagttt
ttagtcttctcggctaccattccgcaaaagctccagcctttcttgaaaaaatacctgtct
aatccagtcatggagcagattaagaccaagacagtgattgctgataccattgataattgg
ctcctgtcaaccaaggggcgggataaaaatgcccagatttatgagattagtcagctcctc
cagccttatctggcgatgatttttgtcaataccaagactcgggcggatgaattgcaggcc
tatctgactgcgcaagggctaaaagtggctaagattcacggtgatatcccgccgcgggag
cgcaagcgtatcatgaatcaggtcaagaatctggattttgaatacatcgtagcaacagac
ttggcggctcgggggattgacatcgagggtgtcagccatgtcatcaatgatgcgattccg
caggatttgtctttctttgtccaccgggttggtcggacgggacgaaatggccttcccggc
acagccattaccctctatcaaccgagtgacgactcagatattcgtgagttggaaaagctg
ggcatcaagtttactcctaagatgatcaaaaatggcgaatttcaagatacctacgaccgg
gatcgccgtgccaatcgggagaagaccaaggaaaagctggacacagaaatgattggtctg
gtcaagaagaaaaagaaaaaaatcaaaccaggctataagaagaaaattcagtgggcagtt
aatgaaaaacgccgcaagaccaagcgggccgagaaccgcgcacgtggtcgggcagaacgc
aaggctaagcgccagactttttag
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