Shinella oryzae: K6301_00120
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Entry
K6301_00120 CDS
T08112
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
soj
Shinella oryzae
Pathway
soj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K6301_00120 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_00120 (mutS)
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
K6301_00120 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
Motif
Other DBs
NCBI-ProteinID:
UPA26159
LinkDB
All DBs
Position
22739..25393
Genome browser
AA seq
884 aa
AA seq
DB search
MMEQFIEIKAANPDSMLFYRMGDFYELFFQDAVDASRALGITLTKRGQHMGLDIPMCGVP
VHAADDYLQRLIALGFRVAVCEQVEDPAEAKKRGSKSVVRRDVVRLVTPGTLTEEKLLSP
SDANYLMAVARIRGGAEPSMALAWIDISTGIFRLSETAQGQLLADILRIDPRELIVPDTL
FHDPDFRPVLDVLGRVAVPQPAVLFDSATAEGRIARYFGVSTLDGFGTFSRAEMAAASAA
VAYVEKTQIAERPPLGRPERESSASTLFIDPATRANLELVRTLSGERSGTLLKAIDRTAT
SGGARLLAERLMSPLTDPDAINARLDSIATLADRPSFCEDLRRALKQLPDMPRALSRIAL
GRGGPRDLGAILQGLSTSAEIARLMASEALEGELAAARDAIATLPLDLSHRLAFMLADEL
PLLKRDGGFIREAADAELDEMRALRDQSRRVIAGLQLEYAEETGVKSLKIKHNNVLGYFI
EVSAGNAAALTDSDAAKARFIHRQTMAGAMRFTTTVLSELETKIANAADRALAIELAAFD
GLVEAVVAEAEAIKAAARALAVVDVSVGLAALAEEQAYCRPVVDGSTMFAIVGGRHPVVE
QALRRQQGTAFVANSCDLSPHDGKGHGAIWLLTGPNMGGKSTFLRQNALIAILAQMGSYV
PAESAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTA
TFDGLSIAWAAVEHLHEANRCRGLFATHFHELTVLSEKLARLSNATMRVKEWDGDVIFLH
EVGPGAADRSYGIQVARLAGLPASVVARAKDVLAKLEDADRKNPASQLIDDLPLFQVAVR
REEVQRSSAPSKVEELVKDLNPDDMTPRAALDALYALKKELGNR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcagtttatcgagatcaaggcggccaatcccgacagcatgctgttctaccgc
atgggggatttctacgagctgttctttcaggatgccgtggacgcttcgcgcgcgctcggc
atcacgctgacgaaacgcggccagcatatgggcctcgacatccccatgtgcggcgtgccg
gtccatgcggcggacgattatctgcaacggctcatcgcgctcggtttccgcgtcgccgtg
tgcgagcaggtcgaggatcccgcggaggccaagaagcgcggctcgaaatccgtcgtgcgc
cgcgatgtcgtacgcctcgtcacaccgggaacgctgaccgaggaaaagctgctctcgccc
tcggacgccaactacctgatggccgtcgcgcgcattcgcggcggggcggaaccctccatg
gcgctcgcctggatcgatatctccaccggcatcttccgcctgtcggagaccgcgcagggc
cagcttctggccgatatcctgcgcatcgacccgcgcgagctgatcgtgccggacaccctg
ttccacgatcccgatttccgcccggtgctcgatgttctcggccgtgtggccgtgccgcag
ccggccgtgctgttcgacagcgccacggcggaaggccgcatcgcgcgctatttcggtgtc
tccacgctcgatggtttcgggacgttttcgcgcgccgagatggctgcggcctccgccgcc
gtcgcctatgtcgaaaagacccagatcgcggagcgcccgccgctcggccggccggagcgc
gaaagctcggcctcgacgctcttcatcgatcccgccacccgcgccaatctcgaactggtc
cgcaccctgtcgggcgagcgcagcggcacgctcctgaaggcgatcgaccgcaccgccacg
agcggcggtgcgcgtcttctcgccgaacgcctgatgtcgccgctgaccgaccccgacgcc
atcaacgcccgcctcgattcgattgcgacgctcgccgaccggccctctttctgcgaggac
ctgcgccgcgccctcaagcagctgcccgacatgccgcgcgcgctttcgcgcatcgcgctc
ggccgtggcggtccgcgtgacctgggcgcgattctccaggggctttccacctccgccgag
atcgcccgcctgatggcgtccgaggcgctggagggcgagctggccgccgcgcgcgacgcg
atcgccacgctgccgctcgatctgtcgcaccgcctggccttcatgctggccgacgagctg
ccgcttctgaagcgcgacggcggcttcatccgcgaggcggccgatgccgagctcgacgag
atgcgggcgctgcgcgaccagtcccgccgcgtcattgccggcctccagctggaatatgcc
gaggaaacgggcgtcaagtcgctgaagatcaagcacaacaacgtgctcggctacttcatc
gaggtgtcggccggaaacgccgcggcgctgaccgacagcgatgcggccaaggcgcggttc
atccaccggcagaccatggccggcgccatgcgcttcaccacgacggtgctgtcggagctt
gaaaccaagatcgccaatgccgccgaccgggcgctcgccatagagcttgccgccttcgac
ggcctcgtcgaggcggtggtggcagaagccgaggcgatcaaggcggcggcgcgcgcgctt
gccgtggtggacgtgtccgtcgggctggcggccctggcggaagagcaggcctattgccgg
ccggtcgtggatggctcgaccatgttcgccatcgtcggcgggcggcatcccgtcgtggaa
caggcgctgcgccgccagcaaggcaccgccttcgtcgccaattcctgcgatctctcgccc
catgacggcaagggccacggcgcgatctggctgctgacaggccccaacatgggcggtaaa
tcgaccttcctgcgccagaatgcgctgatcgccatcctcgcgcagatgggatcctacgtg
ccggccgaaagcgcccatatcggcgtggtcgaccggctgttctcgcgcgttggcgcgtcc
gacgacctggcgcgcggccgctcgaccttcatggtcgagatggtcgagacggcggcgatc
ctcaaccaggcgacggaccgctcgctcgtcattctcgacgagatcggccgcggcaccgcg
actttcgacggcctgtccatcgcctgggcggccgtcgagcacctgcatgaggccaatcgc
tgccgtggcctgttcgccacgcatttccatgaactgacggtgctgtcggagaagctcgca
cgcctttccaacgccacaatgcgcgtcaaggagtgggacggcgacgtgatcttcctgcac
gaggtgggcccgggggctgcggaccgctcctatggcattcaggtggcgcgtcttgcaggc
ctgccggcctcggtcgtggcgcgcgccaaggatgtgctcgcaaagctcgaggatgcggac
cgcaagaacccggcaagccagctgatcgacgatctgccgctgttccaggtcgcggtgcgc
cgcgaggaggtgcagcgcagctctgccccgtcgaaggtcgaggaactggtgaaggacctc
aacccggatgacatgacgccgcgtgcggcgctggatgcgctttatgcgctgaagaaagaa
cttggcaaccggtaa
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