Shinella oryzae: K6301_00175
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Entry
K6301_00175 CDS
T08112
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soj03016
]
K6301_00175 (miaB)
Enzymes [BR:
soj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
K6301_00175 (miaB)
Transfer RNA biogenesis [BR:
soj03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
K6301_00175 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UPA24679
LinkDB
All DBs
Position
35486..36877
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AA seq
463 aa
AA seq
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MSEQSLSAPDAPVATPNTRKVFVKTYGCQMNVYDSDRMTDALSKDGYQATDVLEEADLVL
LNTCHIREKAAEKVYSELGRLREMKKARARDGREMVIGVTGCVAQAEGKEILRRAPAVDL
VVGPQTYHRLPDALRRAKGGERVVETDYAIEDKFEHLPAPEKARTRARGVTAFLTVQEGC
DKFCTFCVVPYTRGSEVSRPVAQIVTEAERLVEGGVREITLLGQNVNAWHGLGPDGTEWG
LGDLLYRLAEIEGLARLRYTTSHPRDMDDRLIEAHRDLSKLMPYLHLPVQSGSDRILKAM
NRRHTAAEYVALIERIRAVQPDLAISGDFIVGFPGETDEDFEDTMRLIGTVGYAQAFSFK
YSIRPGTPGAEMDGHVAEDVKAERLERLQALLFRQQREFARTCIGKEIDLLLEKPGRMPG
QLVGRSPWLQPVNIDAKGSEIGDIIRVRIIDAGPNSLFAEAIG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagtccctctctgcccccgatgcccccgtggccacgccgaacacccgcaag
gtcttcgtgaagacctacggctgccagatgaacgtctatgacagcgaccgcatgacggac
gccctgtcgaaggacggctatcaggcgacggacgtgctggaagaggccgatctggtgctg
ctcaacacctgtcatatccgcgagaaggccgccgagaaggtctattccgagctcggccgc
ctgcgtgagatgaagaaggcgcgcgccagggacggccgcgagatggtgatcggcgtcacc
ggctgcgtcgcccaggccgagggcaaggaaatcctgcgccgcgcgccggccgtggacctc
gtcgtcggtccgcagacctatcaccgcctgcccgatgcgctgcgtcgcgccaagggcggc
gagcgtgtcgtcgagacggactatgccatcgaggacaagttcgagcacctgccggcgccg
gaaaaggccaggacccgcgcgcgcggcgtcaccgccttcctcaccgtgcaggaaggctgc
gacaagttctgcaccttctgcgtcgtgccctatacgcgcggctcggaggtctcccggccg
gtcgcgcagatcgtcacggaggccgagcgcctcgtcgagggcggcgtgcgcgagatcacc
ctgctcggccagaacgtcaatgcctggcacggtctcgggcccgatggaaccgagtggggc
ctgggcgacctgctctaccgcctcgccgaaatcgagggcctggcgcgcctgcggtatacg
accagccatccgcgcgacatggatgaccgcctgatcgaggcccatcgcgacctgtccaag
ctgatgccctatttgcatctgcccgtgcagtccggctccgaccgcatcctgaaagccatg
aaccggcgccacacggccgccgaatatgtcgccctcatcgagcgcatccgcgccgtccag
ccggacctcgcgatctcgggcgatttcatcgtcggcttccccggcgagacggatgaggac
ttcgaggatacgatgcgcctcatcggaaccgtcggttatgcacaggcattttcgttcaag
tattccatccgtcccggcacgccgggggcggagatggacggccatgtggccgaggacgtg
aaggccgaacgccttgaaagattgcaggctttgctgtttcgccagcagcgcgaattcgcc
aggacgtgcatcggcaaggagatcgacctgctcctggagaagcccggccgcatgcccggc
cagctcgtcggccgctcgccctggctccagcctgtgaatattgatgcaaaaggttctgaa
atcggtgacattatccgggtacgaatcatcgatgccgggcccaacagcctcttcgccgaa
gcgatcggttga
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