Shinella oryzae: K6301_00235
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Entry
K6301_00235 CDS
T08112
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_00235
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_00235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_00235
Bacterial motility proteins [BR:
soj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6301_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
dCache_1
DUF948
HAMP_2
Allexi_40kDa
PLU-1
Motif
Other DBs
NCBI-ProteinID:
UPA24690
LinkDB
All DBs
Position
complement(46430..48766)
Genome browser
AA seq
778 aa
AA seq
DB search
MFKLQAKSLATKLIAVTGGTIALVLLASNTVLIQQSQDRVAGLVYSEANTEAKAIASDIA
TDIGQLASAARSMAGVIEQGHANAHFDRKEVVDIIKANAEKNDFALGSWFAEEPNAFDGK
SRETGESLETGTFKDGSFNPYWTKRKDGSIALSTFESDYKAEWYALAANSGKGAMTQPYK
ESSTGEGFTMASIAFPVISGGKRIGVTGVDVSLKTLSDKLSKLAPFGEGRVLLLSQTGKW
LVAPNADLIMKPYEGVGEDVVKSALSTGKPGLVENVTFDELAAFDRVVYPFALPDINTSW
IVLVDVPRAAINAPVQDQTFMMIIGGLIVLAAVLTGLYVAVRIFVQKPLAGLVRDVDALS
GGTYTQPVTGQDRSDETGAVAKALEGFRHQLANTRTLEAEASRQRELTEAERSRSETERA
ESSALQREIVARLGDGLAQLSEGNLAFRLSGDFPGEYGKLKTDFNSAIASLEETIQTVNA
SVGNIGGGTSEISKGAADLSHRTEQQAASLEETAAALDQLTSQVNSSAENARVAAKSVET
ANEDASRSGEVVQKAIDAMHGIESSSREISNIIGVIDDIAFQTNLLALNAGVEAARAGEA
GKGFAVVAQEVRELAQRSANAAKEIKTLINTSESQVRDGVSLVGRAGDALENIAHQVNQI
NDLIRQISSSASEQAVGLKEINAAVNQMDQVTQQNAAMVEETTAASMALNDEAQTLKSLV
ARFRAGAAVTASVQPVQQAARPQVQPQRAAYQPARTASRPIPQVSGNTALAQDDWEEF
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcttcaggccaagtcgctcgcgacgaagctcattgcagtgaccggcggcacc
atcgccctggtgctgctcgcctccaacaccgtgctcatccagcagagccaagatcgcgtc
gccggcctcgtctattcggaggcgaacacggaagcgaaagccatcgcgtccgacatcgcg
accgatatcgggcagctcgccagcgccgcgcgctcgatggccggcgtgatcgagcagggc
catgccaacgctcacttcgaccgaaaggaagtggtcgatatcatcaaggccaatgcggag
aagaacgacttcgcgctcggcagctggtttgcggaagagcccaatgccttcgacggcaag
tcgcgcgagacgggcgagtcgctggagaccggcacgttcaaggatggctcgttcaatccc
tactggaccaagcgcaaggacggctccatcgcgctctccaccttcgaatccgattacaag
gccgagtggtatgccctggcggcgaattccggcaagggcgcgatgacccagccctacaag
gaaagctcgaccggcgaaggcttcaccatggcctcgatcgcgtttcccgtcatatcgggt
ggcaagcgtatcggcgtcaccggcgtcgacgtctcgctgaagaccctctccgacaagctg
agcaagctggcgccgttcggcgaggggcgcgtgctgctgctgtcgcagaccggcaagtgg
ctcgtcgcgccgaatgccgacctcatcatgaagccctatgaaggcgtcggcgaggatgtc
gtcaaatccgcgctctccacgggcaagccgggtctcgtcgagaacgtgaccttcgacgaa
ctcgccgccttcgatcgtgtcgtctaccccttcgcgctgccggacatcaacacgtcctgg
atcgtgctcgtcgatgtgccgcgcgcggcgatcaacgcgcccgtgcaggatcagaccttc
atgatgatcatcggtggcctcatcgttctggctgccgtgctgaccgggctctacgtcgcg
gtgcgcatcttcgtgcagaagccgctcgccggccttgtgcgcgacgtcgatgcgctgagc
ggcggcacctatacgcagcccgtcaccgggcaggaccggtccgatgaaaccggcgccgtc
gccaaggcgctggaagggttccgccaccagctcgccaatacccgcacgctggaagccgaa
gccagccgccagcgcgagctgacggaagccgaacgcagccgctcggagacggagcgcgcg
gaatcgagcgccctgcagcgcgagatcgtcgcccgcctcggcgacggcctcgcccagctc
tccgaaggcaacctggccttccgcctgtccggcgatttcccgggtgaatacggcaagctg
aagaccgacttcaactccgccatcgccagcctcgaggagacgatccagacggtcaacgcc
tctgtcggcaatatcggcggcggcaccagcgagatctccaagggcgcggccgatctctca
caccgcaccgagcagcaggccgcaagcctcgaggagaccgcggccgccctcgaccagctg
acctcgcaggtcaattccagcgcggagaatgcgcgggtcgcggccaagtccgttgaaacg
gcgaacgaggatgccagccggtcgggcgaagtcgtgcagaaggcgatcgatgcgatgcac
ggcatcgagagctcctcgcgcgaaatctccaacatcatcggcgtcatcgacgacatcgcc
ttccagaccaacctgctggcgctcaatgccggcgtggaagcggcgcgcgcaggcgaggcc
ggcaagggcttcgccgtcgtggcgcaggaagtgcgcgagctcgctcagcgctcggccaat
gccgccaaggagatcaagacgctgatcaacacgtcggagtcccaggtgcgcgatggcgtc
agcctcgtcggccgtgcgggcgacgcgctggaaaacatcgcccaccaggtgaaccagatc
aacgatctcatccgccagatttcctcgtccgcctccgaacaggccgtcgggctcaaggaa
atcaacgccgccgtcaaccagatggaccaggtcacgcagcagaacgccgcgatggtggag
gaaaccaccgccgccagcatggcgctgaacgacgaagcccagacgctgaagtcgctcgtc
gcgcgcttccgcgccggcgcggcggtgacggcaagcgtgcagccggtacagcaggcggca
cgcccgcaggtccagccgcagcgtgcggcctaccagcccgcccgcaccgccagccggccg
atcccgcaggtttccggcaacacggcattggcgcaggacgattgggaagagttctga
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integrated database retrieval system
