Shinella oryzae: K6301_00260
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Entry
K6301_00260 CDS
T08112
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soj03016
]
K6301_00260 (truA)
Enzymes [BR:
soj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
K6301_00260 (truA)
Transfer RNA biogenesis [BR:
soj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6301_00260 (truA)
Prokaryotic type
K6301_00260 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
GshA
Motif
Other DBs
NCBI-ProteinID:
UPA24695
LinkDB
All DBs
Position
52861..53604
Genome browser
AA seq
247 aa
AA seq
DB search
MPRYKLVIEYDGTPYVGWQRQDNGPSVQGAIEAAILSLTGETVSIRGAGRTDSGVHAMGQ
VAHADLTRDWKEHTLRNALNAHLGMAGERVAILDAARAPDDFDARFSAKKRHYLYRIISR
KAPLALEANRAWFVARDLDHEAMHAAGQMLVGKHDFTTFRAAQCQANSPVRTIDRLEVTR
SGDLIEMRVSAQSFLHNQIRSFAGTLKLAGEGKWTAGDVRAALEARDRKACGPVAPPDGL
YFMAVDY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctacaagctcgtgatcgaatatgacggcacgccctatgtgggctggcagcgg
caggacaatggcccctccgtccagggcgccatcgaagccgcgatcctgtcgctgaccggc
gagaccgtctcgatccgcggggcggggcgcacggattccggcgtgcacgccatggggcag
gtcgcccatgccgacctgacgcgcgactggaaggaacatacgctccgcaacgccctcaac
gcccatctcggcatggccggcgagcgggtggccatcctcgacgcggcacgggcgcccgac
gatttcgatgcccgcttctccgcgaagaagcgacactatctctaccgcatcatctcgcgc
aaggcgccgctggcgctggaggcgaaccgcgcctggttcgtcgccagggacctcgatcac
gaggccatgcatgcagccggccagatgctggtgggaaaacacgacttcacgacattccgc
gcggcccagtgccaggcgaacagcccggtgcgcaccatcgaccgtctggaggtgacgcgc
agcggcgatctcatcgagatgcgtgtgtccgcgcaaagcttcctgcacaaccagatccgt
tcctttgccggaacgctgaagctggccggcgagggcaagtggacggccggcgatgtgcgc
gcggcgctggaggcgcgcgaccgcaaggcctgcggccccgtcgcgcccccggatggcctt
tacttcatggctgtcgattactga
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