Shinella oryzae: K6301_00545
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Entry
K6301_00545 CDS
T08112
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
soj
Shinella oryzae
Pathway
soj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6301_00545 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_00545 (recF)
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K6301_00545 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
AAA_27
DUF2813
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UPA24748
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All DBs
Position
110046..111170
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AA seq
374 aa
AA seq
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MPHKVSLSRLKLTDFRNYASLSLPLDGRHVVLTGQNGAGKTNLMEAVSFLSPGRGLRRAA
YGDIPRAGSAGGFSVFATLDGMLGEVDIGTGTEGGEEGQARKLRLNGTPARTVDELLDHL
RVVWLTPSMDGLFTGPSADRRRFLDRLVLSLDPEHGRRAADFEKAMRGRNRLLTETRPDP
AWLTALEKQMAELGIAMAHARHELVGLLSGLVEAARDDGPFPSATMRLSGFLDEEWQRPA
YEIEDIYLGLLQDGRYRDAAAGRTLEGPHRADLLIRHREKDMEAERCSTGEQKALLVGLI
LAHAGLVGGMTGHAPVLLLDEIAAHLDEGRRAALFDRVDALGGQAFMTGTDRSMFDALGE
RAQFLTVSNGGILP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaaggtttccctttcccgcctcaagctcacggatttccgcaactatgcgagc
ctgtcgctgccgctcgacggccggcatgtcgtgctgacggggcagaacggtgccggcaag
acgaacctcatggaggccgtgtcgttcctgtcgcccggccgtggcctgcgccgcgccgcc
tatggcgatatcccgcgcgccggaagcgccggcggtttttccgtcttcgccacgctcgac
ggcatgctgggcgaggtggatatcggcaccggcaccgaaggcggcgaggaaggtcaggcg
cgaaagcttcgcctcaacggcacgcccgcccgcaccgtcgacgagcttctcgatcatctg
cgcgtggtctggctgacaccctcgatggacggcctgttcaccggtccctccgccgaccgg
cgccggtttctcgatcggctcgtgctgtcgctcgatcctgagcatggccgtcgcgccgcg
gatttcgaaaaggcgatgcgcggccgcaatcgtctcctcaccgagacgcggcccgatccg
gcctggctgaccgcgctggaaaagcagatggccgagcttggtatcgccatggcccatgcg
cgccacgaactggtggggctgctgtccggcctggtcgaggcggcacgcgacgacgggccg
tttccatcggccacgatgcggctgtccggtttcctggatgaggaatggcagcgccccgcc
tatgagatcgaggacatctatctcggcctgctgcaggacggtcgttaccgggatgccgcc
gccggccgcacgctggaaggccctcaccgtgccgatctcctcatccgtcaccgcgagaag
gacatggaggccgagcgctgctcgacgggcgagcagaaggcactgctcgtcggcctcatc
ctggcccatgcggggcttgtcggcggcatgaccgggcacgcgccggtgctgttgctcgac
gagatcgccgcgcatctcgacgagggccgccgcgccgcactgttcgaccgcgtcgatgcg
cttggcggccaggctttcatgaccggcacggaccggtcgatgttcgatgcgctcggcgag
cgcgcccagttcctcaccgtctcgaacggaggcatcctgccatga
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