Shinella oryzae: K6301_00605
Help
Entry
K6301_00605 CDS
T08112
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_00605
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_00605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_00605
Bacterial motility proteins [BR:
soj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6301_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HAMP_2
4HB_MCP_1
DUF948
ATG17_like
IFT57
COG6_N
Motif
Other DBs
NCBI-ProteinID:
UPA24760
LinkDB
All DBs
Position
121226..123232
Genome browser
AA seq
668 aa
AA seq
DB search
MKIRGKIYLIVGVMGLISVLVGGIAVHVVSEYSAKLERYQNASDRAFLGEHLNRQVTAVV
MEARGIYASKDSENAKKFADGISKELDGIDKTLNDWRPLVPESQKAAFEAVVARAADFRT
FRSETARLGTQVSPAAANEQGNNESNRANRKAFQKEIDAVVETDNANLSAIKSDVAAFET
LMLTLVLGTIGVGLAAGGGAAFYIATNELSRPIQKVTDTMNRLAGGDLATEVPYAGRQDE
IGEMAAAVAVFRQNAITVRDLNAQEQVLREKSADLQSSIATVVHAAAAGDFSSRISKDYD
NDDLNRFASSVNELVASVEEGIAETRRVIGALAEGDLTQTMSGSFRGAFAELQQNVNTTL
ATLQRTMREVRSSTDAINANSGELRTASDDLSKRTEQQAAALEETSAALDEITVAVKNST
DQAGEASRMVAEATQSAKQSGTIVRNAIDAMGRIEQASSEISQIISVIDEIAFQTNLLAL
NAGVEAARAGEAGKGFAVVAQEVRELAQRAASAAKDIKGLITKSSDEVSVGVKYVQETGA
ALTDIEGRVVTINDRIHSIATAAREQATGLQEVSTAINQMDQVTQHNAAMVEETSAATHK
LKAEADGLADLVARFRTGDALPRIAVARTETRPVESPARRMMGNVARAFGGGAAATSAAA
VQENWEEF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattcggggaaaaatctatctcatcgtgggcgtgatggggctcatttctgtgctc
gtcggcggcatcgccgttcatgtcgtgtcagagtacagtgcaaagctcgagcgctaccag
aacgcctcggaccgggcctttctcggcgagcatctgaaccgccaggtcaccgccgtggtg
atggaagcccgtggcatctacgcctccaaggacagcgagaatgcgaagaagttcgccgac
ggcatcagcaaggaactcgatggcatcgacaagacgctgaacgactggcgcccgctggtg
ccggaatcccagaaggcggccttcgaggccgtcgtggcccgtgccgccgacttccgcacc
ttccgctcggaaacggcacggctgggtacgcaggtttcgcctgccgctgccaatgagcaa
ggcaataacgagagcaaccgggccaaccgcaaggcgttccagaaggaaatcgacgccgtt
gtcgaaaccgacaacgccaatctgagcgccatcaaaagtgacgtcgccgctttcgaaaca
ctgatgctcaccctggtgctgggcacgatcggcgtcggtctggccgccggtggcggtgcg
gccttttacatcgcgaccaacgagctgagccggccgatccagaaggtcacggacacgatg
aaccgccttgcgggcggcgacctcgcgacggaagtgccctatgcgggccgtcaggacgag
atcggcgaaatggcggccgccgtcgccgtcttccgccagaacgccatcaccgtacgggat
ctcaatgcgcaggaacaggttctgcgcgagaagagcgccgacctccagtcctccatcgcc
accgtcgtccatgccgccgcagccggtgacttttcctcgcgcatcagcaaggattacgac
aacgacgacctcaaccgtttcgcaagcagcgtcaacgaactggtcgccagcgtcgaggaa
ggcattgccgaaacccgccgcgtcatcggcgcgctggccgagggcgacctcacgcagacc
atgagcggcagtttccgcggcgccttcgccgaactgcagcagaacgtcaacacgacactc
gccacgctccagcgcacgatgcgcgaggtgcggtcgtccaccgatgcgatcaacgccaat
tccggcgagctgcgcaccgcatccgacgatctgtccaagcgcaccgagcagcaggccgcg
gcccttgaggaaacctccgccgcgctcgacgagatcaccgtcgccgtgaagaattcgacg
gaccaggcgggcgaggcgagccgcatggtcgccgaggcaacccagagcgccaagcagtcc
ggcaccatcgtgcgcaacgccatcgatgccatgggccgtatcgagcaggcttcgtcggag
atcagccagatcatctcggtaatcgacgagatcgccttccagaccaacctgctggcgctc
aatgccggcgtcgaggccgcccgtgcgggcgaggccggcaagggtttcgccgtggtcgcg
caggaagtccgcgaactcgcacagcgtgccgccagcgccgcgaaggacatcaagggtctg
atcaccaagtcctccgacgaggtgtcggttggcgtcaaatacgtgcaggagacgggtgcc
gcactgaccgacatcgagggccgcgtcgtgaccatcaacgatcgcatccactccatcgcc
accgccgcccgcgagcaggcgaccggccttcaggaagtcagcaccgccatcaaccagatg
gaccaggttacccagcacaacgccgccatggtcgaggagacctcggccgcgacccataag
ctcaaggcggaagccgacggcctcgccgacctggtcgcccgcttccgcaccggcgacgcg
ctgccacgcatcgctgtcgcccgtacagagacgcgcccggtcgaatcaccggcccgccgc
atgatgggcaatgttgcccgcgccttcggtggcggcgccgcggccacgtctgccgccgcg
gtccaggagaactgggaagagttctga
DBGET
integrated database retrieval system
