Shinella oryzae: K6301_00895 Help Entry K6301_00895       CDS       T08112                                  Name (GenBank) FAD-dependent oxidoreductase   KO K01782   3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Organism soj  Shinella oryzae Pathway soj00071   Fatty acid degradation soj00280   Valine, leucine and isoleucine degradation soj00310   Lysine degradation soj00362   Benzoate degradation soj00380   Tryptophan metabolism soj00410   beta-Alanine metabolism soj00640   Propanoate metabolism soj00650   Butanoate metabolism soj00907   Pinene, camphor and geraniol degradation soj00930   Caprolactam degradation soj01100   Metabolic pathways soj01110   Biosynthesis of secondary metabolites soj01120   Microbial metabolism in diverse environments soj01200   Carbon metabolism soj01212   Fatty acid metabolism Brite KEGG Orthology (KO) [BR:soj00001]  09100 Metabolism   09101 Carbohydrate metabolism    00640 Propanoate metabolism     K6301_00895    00650 Butanoate metabolism     K6301_00895   09103 Lipid metabolism    00071 Fatty acid degradation     K6301_00895   09105 Amino acid metabolism    00280 Valine, leucine and isoleucine degradation     K6301_00895    00310 Lysine degradation     K6301_00895    00380 Tryptophan metabolism     K6301_00895   09106 Metabolism of other amino acids    00410 beta-Alanine metabolism     K6301_00895   09109 Metabolism of terpenoids and polyketides    00907 Pinene, camphor and geraniol degradation     K6301_00895   09111 Xenobiotics biodegradation and metabolism    00362 Benzoate degradation     K6301_00895    00930 Caprolactam degradation     K6301_00895 Enzymes [BR:soj01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.35  3-hydroxyacyl-CoA dehydrogenase      K6301_00895  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.17  enoyl-CoA hydratase      K6301_00895  5. Isomerases   5.1  Racemases and epimerases    5.1.2  Acting on hydroxy acids and derivatives     5.1.2.3  3-hydroxybutyryl-CoA epimerase      K6301_00895 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  3HCDH_N ECH_1 3HCDH ECH_2 DAO NAD_binding_2 UDPG_MGDP_dh_N FAD_binding_3 NAD_Gly3P_dh_N F420_oxidored NAD_binding_8 ApbA Pyr_redox Pyr_redox_2 2-Hacid_dh_C GIDA LSDAT_euk TrkA_N ThiF Motif Other DBs NCBI-ProteinID:  UPA24810 LinkDB All DBs Position complement(177747..179957) Genome browser AA seq 736 aa AA seqDB search MSAYKNFTIETDADGIALVTWDMPDKSMNVFTVEVMDELDKIIDQVAADSAVKGAVITSG KSSFSGGADLSMIKASFDLLKDAQAADPATAVQKLFETTGRMTWLFRKLETSGKPWVSAI NGTCMGGAFEMSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVPRLANAQDALQMM TTGSSLTGARAKAMNLVHQVVEPGELIPAAKQMIKDGLKPVQPWDEKGFKAPGGGIWTPA SAQLWPAAPAILRRETAGNYPGALAILKCVYEGLQVPFETGLRIEQRYFTHILQTTEAFS MIRSLFISMQELGKGARRPAGIPKAEFRKVAVVGAGFMGASIAYVTAAAGIPVVLIDRDQ EAADKGKTHSEGLVTGAIGKGRMSREDGEKLLSLITPTPDYAALADADLVIEAVFEDRTV KKEVTEKIEAVLREDAIFASNTSTLPITGLARNSKRPDQFIGIHFFSPVEKMMLVEVILG KETGDKALATALDYVAAIKKTPIVVNDTRGFYVNRCVFRYMAEAYDMLIEGVPAAMIENA AKMAGMPVGPLSLNDEVAVDLSYKIFKASIADLGPQSVDPRHMELVTKLVEGEGRLGRKA GKGFYDYPLKPQKKKLWPGLKDLYPQQKPEDVDIQVLKERLLVTIALEAARTMEEGIVTD PREADVGSILGFGFAPYTGGTLSYIDGMGVKAFVALCEKLAAQYGSHFQPTPLLKDMAAK GETFYGRFAPEAKKAA NT seq 2211 nt NT seq  +upstreamnt  +downstreamnt atgagcgcatacaagaacttcaccatcgagaccgacgccgacggcattgcgctggtcacc tgggacatgcccgataagtcgatgaacgtcttcaccgtcgaggtgatggacgagctggac aagatcatcgaccaggtcgcggccgacagcgccgtcaagggtgcggtcatcacgtcgggc aagtcctccttctccggcggcgcggatctctcgatgatcaaggcgagcttcgacctcctg aaggacgcgcaggccgccgatcccgcgaccgccgtgcagaaactgttcgaaaccacgggc cgcatgacctggctgttccgcaagctggagacatcgggcaagccctgggtctccgccatc aacggcacctgcatgggcggcgccttcgaaatgtcgctcgcctgccacggccgcgtggcc tcgaatgccaagtcggtcaagatcgcgctgcccgaggtcaaggtcggcatcttccccggc gccggcggcacccagcgcgtgccgcgccttgccaacgcgcaggacgcgctgcagatgatg acgaccggctcgtcgctgaccggcgcgcgcgccaaggcgatgaacctcgtgcatcaggtc gtcgagcccggtgagctcatccccgctgccaagcagatgatcaaggacggcctgaaaccc gtccagccctgggatgagaagggcttcaaggcccccggaggcggcatctggacgcccgcc tccgcccagctctggccggccgcccccgccatcctgcgccgcgagaccgcgggcaattat ccgggcgcgctcgccatcctgaaatgcgtctatgaaggccttcaggtgccgttcgagacg ggcctgaggatcgagcagcgctacttcacccatatcctccagacgaccgaagccttctcg atgatccggtcgctgttcatctccatgcaggagctcggcaagggcgcgcgccgtccggcc ggcattcccaaggcggagttcaggaaggtcgccgtcgtcggcgccggcttcatgggcgcc tccatcgcctatgtgacggccgccgccggcatcccggtggtcctcatcgaccgcgaccag gaggccgccgacaagggcaagacccattccgaaggcctcgtcaccggcgccatcggcaag ggccgcatgtccagggaggacggcgaaaagctgctgtccctcatcacaccgacccccgat tatgccgcgctcgccgatgccgacctcgtcatcgaggcggtcttcgaggaccgcacggtc aagaaggaggtgaccgagaagatcgaggccgtgctgcgcgaggacgccatcttcgcctcc aacacctcgacgctgccgatcacgggcctcgccaggaattcgaagcggccggaccagttc atcggcatccacttcttctcgccggtcgagaagatgatgctggtggaggtcatcctgggc aaggagacgggcgacaaggcgctcgccaccgcgctggattacgtcgccgccatcaagaag acgccgatcgtcgtcaacgatacgcgcggcttctacgtcaaccgctgcgtcttccgctac atggccgaagcctatgacatgctgatcgaaggcgtgccggcggcgatgatcgagaatgcc gccaagatggccggcatgccggtcggccccctgtcgctcaacgacgaggtggccgtcgat ctctcctacaagatcttcaaggcctccattgccgatctggggccccagtctgtcgatccg cgccacatggaactggtgacgaagctggtggaaggcgaaggccgtctcggccgcaaggcc ggcaagggcttctacgactacccgctgaagccgcagaagaagaagctctggcccggcctg aaggacctctacccgcaacagaagccagaggatgtcgatatccaggtgctgaaggagcgc ctgctcgtcaccatcgcgctggaagccgcccgcaccatggaagaaggcatcgtcaccgat ccgcgcgaggccgatgtcggctccattctcggtttcggcttcgccccctataccggcggc acgctgtcctacatcgacggcatgggcgtgaaggccttcgtggcgctctgcgagaaactg gccgcccaatacggcagccacttccagccgacgccgctcctgaaggacatggccgccaag ggcgaaaccttctacggccgctttgcgccggaggcgaagaaggccgcctga

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