Shinella oryzae: K6301_01020
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Entry
K6301_01020 CDS
T08112
Name
(GenBank) hybrid sensor histidine kinase/response regulator
Organism
soj
Shinella oryzae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
Response_reg
PAS_8
PAS_4
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UPA24834
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Position
complement(203458..206958)
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AA seq
1166 aa
AA seq
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MPGSLIIALALAYLLLLFAVASYGDSKARRSERASKGRPLVYALSLAIYCTSWTYFGGVG
LATTHGLEFLGIYIGPILMFTLGMPLLRRIVTLAKSERLTSIADFVAARYGKNPGVAAVV
ALISLIGYIPYIALQLKAVSSSVAAMVDTTGFGIAASGGLIDLPLVVSLFLACFAIVFGT
RHTDATEHQDGLILAISMESVVKLIAMASVGFYVIFFMFDGPGDLWQRASESVPVMQALT
YETPLARWILLIVLSAFAIVMLPRQFHVTVVENRTMGELRTAGILFPLYLIAINLFVLPV
AIGGVLTFNGQGDADLYVLTLPFALDQPLLTLIAFIGGFSAATAMVIVASVALSIMVSND
IVIPVVLRRNLIGGVEQQDDLSRMLLRIRRLAIFFVILLGYAYYRATTANAGLASMGLLA
FAAVAQVAPALLGGLFWRNANARGAMAGMICGLVVWAYLLFLPSIGVADNAYVAETILGF
LFPGTTLFTGEAADPLVNATLVAMMVNVGAYVIGSLTRNPTSLERLQAGTFIRSKPRLER
AFRGRRTKVTVRDLKTTIAKYLGEERMQRSFHTYERQVGRWLEDNAPADAAIVHFSEQLL
GSAIGSSSARLVLSLVLQRIDDTPTDTDWLLDQASEALQYNQDMLQTALGQMDQGIAVFD
SDGNLTVWNRRFRQLLDLPEYVGQVGFPLADIVEILVERGDIAENDRETAISRIMTFDEA
FPLVLAGGERIVEVRTNAMPEKGFVSTYTDITDRVAADRALKQVNETLEHRVAERTAELT
RVNTALAEARAAAEEANIGKTRFFAAAGHDILQPLNAARLYSSSLVERLGDTENREMIHN
IDSSLESVEAILGAVLDISRLDTGAMKPRVQTVLLKDLLKRIETDFAPIARAKDLRFKVL
PSSLAIRTDPNLLRRVVQNLVSNAIKYTQSGKVLVGVRRKGGHAVIQVLDSGIGIPASKF
RTVFKEFARLDEGARTAPGLGLGLSIVDRISRVLSHPVELQSMPGRGTSFKVRVPIDAMA
SRPVAENSARAPVSEEPLKGLRVLCIDNEPRILDGMRLLLSGWGCTVTLADSVAAVEAIV
AEDAAGFDAVIADYHLDDGTGIAAIARLRKALGREVPALLVTADRTPDVRAEAERDNILV
QNKPVRPASMRAWLTQLSTVERAAAE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcgctgatcatcgcgctcgcgctcgcctatctgctgctgcttttcgcggtc
gcaagttacggcgacagcaaggcccggcgctccgaacgcgcgtcgaagggccggccgctc
gtctatgcgctgagccttgcgatctactgcacttcctggacctatttcggcggcgtgggc
ctcgccaccacgcatggccttgaatttctcggcatctatatcggcccgatcctgatgttc
acgctcggcatgccgctgctgcgccgcatcgtgacgctcgccaagtccgagcgcctcacc
tcgatcgccgatttcgtggccgcccgctacggcaagaacccgggtgtggccgccgtcgtc
gcactcatctcgctgatcggctacattccctatatcgcgctgcaattgaaggccgtgtcg
agctcggtcgccgcgatggtggacacgaccggcttcggcatcgccgcttccggcggcctc
atcgacctgccgctggtcgtttcgctgttcctcgcctgctttgccatcgtcttcggcacg
cgccacacggatgcgaccgagcatcaggacgggctcatcctcgccatctccatggaatcg
gtggtcaagctcatcgccatggcctcggtcggcttctacgtcatcttcttcatgttcgac
ggccccggcgatctctggcagcgggcgtccgaaagcgtgcccgtgatgcaggcgctgact
tacgagacgccgctcgcgcgctggatcctgctgatcgtgctgtcggccttcgccatcgtc
atgctgccgcgccagttccacgtcacggtcgtggaaaaccgcacgatgggggaattgcgc
acggcgggcatcctctttccgctctacctcatcgccatcaacctcttcgtcctgcccgtc
gcgatcggcggcgtcttgaccttcaacgggcagggcgatgccgatctctacgttctcacc
ctgcccttcgcgctcgaccagccgctcctgaccctgatcgccttcatcggcggcttttcg
gccgccaccgccatggtcatcgtcgcctcggtggcgctgtccatcatggtgtcgaacgac
atcgtcatcccggtcgtgctgaggcgcaacctcatcggcggcgtcgagcagcaggacgac
ctgtcgcgcatgctgctgcgcatccgccgtctcgccatcttcttcgtgatcctgctcggc
tacgcctattatcgcgcgacgaccgccaacgccgggctcgcctcgatggggcttctggcc
ttcgccgcggtggcgcaggtcgcgcccgcgctgctcggcggcctgttctggcgcaatgcc
aatgcacgcggcgccatggcgggcatgatctgcggcctcgtggtctgggcctacctgctg
ttcctgcccagcatcggggtcgccgacaacgcctatgtcgccgaaaccatcctcggcttc
ctcttccccggcaccacgctcttcaccggcgaggccgcggatccgctggtcaacgccacg
ctggtcgccatgatggtcaatgtcggcgcctatgtgatcggctcgctgacgcgcaatccg
acatcgcttgagcgtcttcaggccggcaccttcatccgctccaagccccgcctggagcgc
gccttccgcggccgccgcaccaaggtcacggtccgcgacctcaagaccaccatcgccaaa
tatctcggcgaagagcgcatgcagcgctccttccacacctatgagcggcaggtcggccgg
tggctggaggacaatgcgccggcggatgccgccatcgtgcatttttccgaacagcttctc
ggcagcgccatcggttcgtcctcggcccgcctcgtgctctcgctcgtgctccagcgcatc
gacgacacgccgacggacaccgactggctgctcgaccaggccagcgaggcgctgcaatac
aatcaggacatgctccagaccgcgcttggccagatggaccagggcatcgccgtcttcgac
agcgacggcaatctcaccgtctggaaccggcgcttccgccagttgctcgacctgccggaa
tatgtcggccaggtcggcttcccgctcgccgatatcgtcgagatcctcgtcgagcgcggc
gatatcgcggagaacgacagggaaaccgcgatttcccgcatcatgaccttcgacgaggcc
ttcccgctggtgctggccggcggcgagcgcatcgtggaggttcgcaccaatgccatgccg
gaaaagggcttcgtttccacctataccgacatcaccgaccgggtggcggccgaccgcgcg
ctcaagcaggtcaacgagacgctggaacatcgcgtcgccgagcgcacggcggagctgacc
cgtgtcaacacggcgctggccgaggcccgcgccgccgccgaggaagccaatatcggcaag
acgcgcttcttcgccgcggccggccacgacatcctccagccgctgaatgccgcccggctc
tactcctcctcgctggtcgagcggctgggcgatacggaaaaccgcgagatgatccacaac
atcgattcctcgctggaatcggtggaggcgatcctcggcgccgtgctcgacatttcgcgc
ctcgataccggagcgatgaagccgcgggtgcagacggtcctgctcaaggacctgctgaag
cgcatcgagaccgatttcgctcccatcgcgagggccaaggacctccgcttcaaggtgctg
ccgagttcgctcgccatccgcaccgatcccaacctgctgcgccgcgtcgtgcagaacctc
gtgtccaacgccatcaagtacacccagtccggcaaggtgctcgtcggcgtgcggcgcaag
ggcgggcatgccgtgatccaggtgctggattccggcatcggcattcccgcatcgaaattc
cgcaccgtcttcaaggaattcgcccgcctcgacgagggcgcccgcacggcgccgggcctc
gggctcgggctttccatcgtggatcgcatctcgcgcgtgctctcgcatcccgtcgagttg
cagtcgatgcccggccgcggcaccagcttcaaggtccgtgtgcccatcgatgccatggca
agccggcccgtggccgaaaactccgcacgcgcgccggtgagcgaagagccgctgaagggc
ctgcgggtgctgtgcatcgacaacgaacccaggatcctcgatggcatgcgtctgctgcta
tccggctggggctgcaccgtgacgctcgcggattccgtcgcggcggtcgaagcgatcgtg
gcggaggacgcagccggattcgatgccgtgatcgccgactatcacctcgacgacgggacc
gggatcgcggcgatcgcgaggctgcgcaaggcgcttggccgcgaggtgccggcgctgctc
gtcaccgccgaccgtacgccggatgtgcgcgccgaggcggaacgcgacaatatcctcgtg
cagaacaagcccgtccgccccgcctcgatgcgagcctggcttacgcagctttcaacggtg
gagcgcgcggccgcggaatga
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