Shinella oryzae: K6301_01210
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Entry
K6301_01210 CDS
T08112
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
soj
Shinella oryzae
Pathway
soj03030
DNA replication
soj03430
Mismatch repair
soj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6301_01210
03430 Mismatch repair
K6301_01210
03440 Homologous recombination
K6301_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soj03032
]
K6301_01210
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_01210
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6301_01210
DNA replication proteins [BR:
soj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6301_01210
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6301_01210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_16
AAA_14
AAA_5
AAA_19
AAA_18
RuvB_N
AAA_24
AAA_assoc_2
SKI
SRP54
TsaE
DUF815
Rad17
AAA_2
CbiA
nSTAND3
AAA_33
AAA_28
RNA_helicase
ABC_tran
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
UPA24868
LinkDB
All DBs
Position
243271..245151
Genome browser
AA seq
626 aa
AA seq
DB search
MSDETQNPSTEKPAAYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLTGV
RGVGKTTTARILARALNYKTSDIDKPTIDLRVPGEHCQAIMEGRHVDVIEMDAASHTGID
DIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKV
PITVLSRCQRFDLRRIGASDLVGLFTTILGKEGVAFEPDALAMVARAAEGSARDGLSLLD
QAIAHGAGRVEVDAVRSMLGLADRARIVDLFEHIVKGDAAAALAEFAAQYEAGASPSVVL
TDLADFTHLVTRMKYVPDATGDQSLSEIERVRGVEFANSIAVTALSRIWQMLLKGIPETE
ASSRPAGAAEMVIIRLAHAANLPSPEDAARRLAELSSGDGGGNGARAPQSGGYGGQPSAQ
GSVSAVARQPDAPMRAQAGGGTVTMLRPVPQAESAPQPVGRIETAPAEQPAAAPKVPVKS
ISDIADLCTKNRDIRLRALVRAFIRPVSVEAGKLEISLTDDAPKSLVSELSNRLLEWTGT
RWLVILSREAGGPTLAEAETMAQEARVADARQDPDVAAILQRFPGAKITDVRIKVPETED
EPETIEAAAIAESAEGDILPGDDIEH
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaaacgcaaaatccgtccactgaaaagcccgccgcctatcgcgtgcttgcg
cgaaagtaccggccgaaggatttctccgacctcatggtcggccaggagccgatggtccgc
acgctgaccaacgccttcgagacgggccgcatcgcccaggcctacatgctgaccggcgtt
cgcggtgtcggcaagacgacgaccgcccgtatccttgcccgcgcgctgaactacaagaca
tcagacatcgacaaaccgacgatcgacctgcgcgttcccggcgaacattgccaggcgatc
atggaaggccggcatgtcgacgtcatcgagatggacgccgcctcccataccggcatcgac
gatatcagggaaatcatcgagcaggtgcgctaccgcccggtttcggcgcgctacaaggtc
tatatcatcgacgaagtgcacatgctctcgacgcaggctttcaacggcctcttgaagacg
ctcgaagagccgccggagcatgtgaagttcattttcgcgacgacggaaatccgtaaggtg
ccgatcaccgtcctgtcgcgctgccagcgcttcgacctgcggcgcatcggcgcgtccgat
ctcgtcggcctgttcaccaccattctcggcaaggaaggcgtggcgttcgagccggatgca
ctggccatggtcgcccgtgcggccgaaggctccgcgcgtgacggcctgtcgctgctcgac
caggcgatcgcccatggggcgggccgcgtcgaggtcgatgccgtgcgctccatgctcggc
cttgccgaccgcgcgcgcatcgtcgatctcttcgagcacatcgtgaagggtgatgcggca
gcggctttggccgagttcgccgcgcaatacgaggccggcgccagcccgtccgtggtgctg
accgaccttgccgatttcacccatctcgtcacgcgcatgaaatatgtgcccgatgccacc
ggtgaccagtcgctgagcgagatcgagcgcgtgcgcggcgtggaattcgccaattccata
gcggtcacggcgctgtcgcgcatatggcagatgctgctgaagggcattcccgaaacagaa
gcctccagccgtccggcgggtgccgccgagatggtcatcatccgtcttgcccatgcggca
aaccttccctcgccggaagatgccgcacgccggcttgccgagctttcgagcggtgacggc
ggtggcaacggcgcgcgtgcgccgcaatccggcggctatggcgggcaaccgtcggcgcag
ggttcggtgtccgcggtcgcgcgccagccggatgcgccgatgcgcgcccaggcgggcggc
ggaaccgtcacgatgctgcgcccggtgccgcaggccgaatccgcaccgcagccggtcggc
cgcatcgagaccgcacccgccgagcagccggcagcggcgccgaaggtgccggtcaagtcg
atctccgatattgccgacctctgcaccaagaaccgggacatcaggctgcgcgcgctggtg
cgcgccttcatacggcccgtgagcgtggaagcgggcaagctcgaaatcagcctgaccgac
gatgcgccgaagtcgctggtctccgaactgtcgaaccgtctcctggaatggacaggcacg
cgctggctcgtcatcctgtcgcgggaggccggcggccccacgctggccgaggccgagacg
atggcgcaggaagcgcgcgtggccgatgcccggcaggaccctgacgtcgccgccattctc
cagcgtttccccggcgcgaagatcaccgacgtgcgcatcaaggtgccggagacggaagac
gagccggagaccatcgaggccgccgccatcgcggaatccgccgagggcgatatcctgccc
ggcgacgatatcgaacattaa
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