Shinella oryzae: K6301_01245
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Entry
K6301_01245 CDS
T08112
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soj03021
]
K6301_01245 (nusA)
03009 Ribosome biogenesis [BR:
soj03009
]
K6301_01245 (nusA)
Transcription machinery [BR:
soj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
K6301_01245 (nusA)
Ribosome biogenesis [BR:
soj03009
]
Prokaryotic type
rRNA transcription factors
K6301_01245 (nusA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
PGBA_C
Motif
Other DBs
NCBI-ProteinID:
UPA24873
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Position
250838..252439
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AA seq
533 aa
AA seq
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MAVSANRLELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGTESNIRADINSKTGE
IRLQRLLEVVEHAEDYSTQIPLELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIV
QKVREAERDRQYDEYKDRIGEIVNGTVKRVEYGNVIVDLGRGEGIIRRDEMIPRENMRYG
DRVRAFVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKI
AVISNDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSQDPASFIVNALQPAEVAKV
VLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDILTEAEESERRQKEFNERT
NLFMEALDVDEMVGQVLASEGFAAVEELAYVDLDEIASIDGFDEDTAQELQTRAREHLDR
LEAEMDAKRKELGVSDDLRQIDGMTSQMLVALGEDGIKTMEDFAGCAADDLVGWTERKDG
ETKKFEGLFSKFEVSRAEAEAMIVQARLAAGWITQEDLAAEEEEVVEGGEEDA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagtgcgaaccggcttgagcttctgcagatcgcggatgccgtggcccgtgaa
aaggtcatcgaccgcgagatcgtgcttgccgcgatggccgacgccatccagaaggcagcc
cgctcgcgttacggtacggaatcgaacatccgcgccgacatcaattccaagaccggcgaa
atccgcctccagcgtctgcttgaggtcgtcgagcacgccgaggactattcgacccagatc
ccgctggaactggcacgcgaccgcaaccccgacgccaagctcggcgacttcatcgccgac
ccgctgccgccgatggacttcggccgcatcgccgcccagtcggccaagcaggtcatcgtg
cagaaggtgcgcgaagccgagcgcgaccgccagtatgacgaatacaaggaccgcatcggc
gagatcgtcaacggcacggtcaagcgcgtcgaatacggcaacgtcatcgtcgatctcggc
cgtggcgaaggcatcatccgccgcgacgagatgatcccacgcgagaacatgcgctacggc
gaccgcgtccgcgctttcgtctacgacgtgcgccgcgagcagcgtggcccgcagatcttc
ctgtcgcggacccatccgcagttcatggtgaagctcttcaccatggaagtgcccgagatc
tacgacggcatcatccagatcaagtcggttgcccgcgacccgggttcgcgcgccaagatc
gccgtcatctcgaacgactcgtcgatcgatccggtcggcgcctgcgtgggtatgcgcggt
tcgcgcgtccaggccgtcgtcggcgagctgcagggcgagaagatcgacatcatcccgtgg
agccaggatccggcttccttcatcgtcaacgcccttcagccggccgaagtcgccaaggtc
gttctcgacgaggatgccgagcgcatcgaagtcgtcgttcccgacgagcagctgtcgctg
gccatcggccgccgcggccagaatgtccgccttgcctcgcagctaaccggctgggacatc
gatatcctgacggaagccgaagagtccgagcgtcgccaaaaggaattcaacgagcgcacc
aacctcttcatggaagcgctcgacgtggatgagatggtcggtcaggttctggcctccgaa
ggcttcgccgccgtcgaggaactcgcctacgtcgatctcgacgaaatcgcctcgatcgac
ggtttcgacgaagacacggcccaggaactccagacccgcgcccgcgagcatctcgaccgc
ctcgaggccgagatggatgccaagcgcaaggagctcggcgtttccgacgacctgcgccag
atcgacggcatgacgagccagatgctcgttgcgctgggcgaagacggcatcaagacgatg
gaagacttcgcaggttgcgccgcagacgacctcgtcggctggaccgagcgcaaggatggc
gagacgaagaagttcgagggtctgttctcgaagttcgaggtttcccgcgccgaggccgag
gcgatgatcgttcaggcccgtctggcggccggctggatcacgcaggaggatctcgccgct
gaggaagaggaagtcgtcgagggcggtgaagaggacgcctga
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