Shinella oryzae: K6301_01365
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Entry
K6301_01365 CDS
T08112
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
soj
Shinella oryzae
Pathway
soj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
K6301_01365 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
soj03011
]
K6301_01365 (rpsA)
Ribosome [BR:
soj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
K6301_01365 (rpsA)
Bacteria
K6301_01365 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5
OB_RRP5_4th
DUF5446
Motif
Other DBs
NCBI-ProteinID:
UPA24896
LinkDB
All DBs
Position
273997..275703
Genome browser
AA seq
568 aa
AA seq
DB search
MSQANPTREDFAALLQESFASNDLAEGYVAKGIVTAIEKDVAIIDVGLKVEGRVPLKEFG
AKSKDGTLKVGDEVEVYVERIENALGEAVLSREKARREESWAKLEVKFEAGERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQQVKVQIIRINQETHRISLGMKQLESDPWDGIGTKYPTGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPTKRRISLGLKQTLENPW
QAFAHSHPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEYNKGDV
VKAVVLDVDVDKERISLGIKQLGKDSVGDAAASGDLRKNAVVSAEVIAINDGGIEVKLVG
HEDLTSFIRRADLSRDRDEQRPERFSVGQTVDARVLSFSKKDRKIQLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRNNAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagcaaaccccacgcgcgaagatttcgcagcccttctgcaggaatcctttgcg
tccaacgatctcgccgaaggctatgttgccaagggtatcgttaccgcgatcgaaaaggac
gtcgccatcatcgacgtcggcctcaaggttgaaggtcgcgttccgctgaaggaattcggt
gccaagtccaaggacggcacgctgaaggtcggcgacgaagtcgaagtttatgtcgagcgc
atcgaaaacgcgcttggtgaagccgttctgtcgcgcgaaaaggctcgccgcgaagaaagc
tgggccaagctcgaagtcaagttcgaagccggcgagcgcgtcgaaggcgtcatcttcaac
caggtcaagggtggcttcaccgtcgatctcgacggcgccgttgccttcctgccgcgttcg
caggtcgacatccgtccgatccgcgacgtcacgccgctcatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgtcgcggcaacatcgtcgtttcgcgccgcacggtcctc
gaagagtcccgcgccgagcagcgttctgaaatcgttcagaacctcgaagaaggccaggtt
gttgacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctcggcggcatc
gacggcctgctgcacgtcaccgacatggcctggcgccgcgtcaaccatccgtcggaaatc
ctgtccatcggccagcaggtcaaggttcagatcatccgcatcaaccaggaaacccaccgc
atctcgctcggcatgaagcagctcgagtcggatccgtgggatggcatcggcacgaagtac
ccgaccggcaagaagatttccggtacggttacgaacatcaccgactacggtgcgttcgtc
gagctggagccgggcatcgaaggcctgatccacatctccgaaatgtcctggacgaagaag
aacgttcaccccggcaagatcctgtccacgagccaggaagtcgacgtggtcgttctcgaa
gtcgacccgacgaagcgccgcatctcgctcggtctcaagcagaccctcgagaacccgtgg
caggccttcgcgcacagccacccggctggcacggaagtcgaaggcgaagtcaagaacaag
accgaattcggtctgttcatcggcctcgaaggcgacgtggacggcatggtgcacctctcc
gacctcgactggaaccgtccgggcgagcaggtcatcgaggagtacaacaagggcgacgtc
gtcaaggctgtcgttctggatgttgacgtcgacaaggagcgtatctcgctcggcatcaag
cagctcggcaaggactcggtcggcgacgccgccgcttccggcgacctgcgcaagaatgcc
gtcgtctcggctgaagtcatcgcgatcaacgacggtggcattgaagtgaagctcgtcggc
catgaggacctcacgtccttcatccgccgcgctgacctttcgcgtgaccgtgacgaacag
cgtccggagcgtttctcggtcggccagaccgtcgacgcccgcgtcctgagcttctcgaag
aaggatcgcaagatccagctttcgatcaaggctctggaaatcgctgaagagaaggaagcc
gtcgcacagttcggttcgtccgactcgggcgcttcgctcggcgacatcctcggcgcggct
ctgaagaaccgcaacaacgccgagtaa
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