Shinella oryzae: K6301_01710
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Entry
K6301_01710 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_01710
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K6301_01710
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_23
HTH_3
HTH_26
Xre-like-HTH
HTH_IclR
HTH_Tnp_ISL3
HTH_24
Peripla_BP_6
HTH_Crp_2
EccE
Motif
Other DBs
NCBI-ProteinID:
UPA24961
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All DBs
Position
complement(340148..341176)
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AA seq
342 aa
AA seq
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MNLKQLSQLLGLSQTTVSRALNGYPEVNAETRQRVLDAVRETGYRPNRAAQRLATGRAGS
IGLVMPTADGIESDVHFGEFLAGLGDEAVRHDFHFVINPSHPEDEVATCRRLVASGNVDA
LFLAYMREKDPRIAMMKSLKTPFIVHGRSIGIADDYPYLDIDNTGAFYDAARLLTQLGHR
RFALINGPDYLAFSVRRRKGVARALAELGLSLREECVTHAQMTDEHGFRAMQAFLRLEAP
PTAVLCSSTVLALGAVRAINQAGLKIGADISLIAHDDVLPMLKPENFMVPLTTTRSSLRA
AGQRIARRLIAQILQLETLPQQELWKADLIVRASTGAAPPDR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctcaagcaattatcgcaattgctgggcctctcccagactaccgtcagccgggcg
ctgaacggttatccggaggtcaatgccgaaacgcgccagcgggtgctcgatgcggtgcga
gaaacgggataccgccccaaccgcgccgcccagcgcctggccaccggccgcgccggctcg
atcggccttgtcatgccgacggccgacggcatcgaatccgacgtgcatttcggcgaattc
ctggcgggcctcggcgacgaagcggtcaggcacgatttccatttcgtcatcaatccgagc
cacccggaagacgaagtcgccacctgccgcaggcttgtggcaagcggcaatgtggacgcg
ctgttcctggcgtatatgcgggagaaggatccgcgcatcgccatgatgaagtcgctgaag
acgccgttcatcgtgcacgggcgatcgatcggcatagcggatgactatccgtatctggac
atcgacaatacgggcgcgttctacgatgccgcacgcctgctgacgcaactcggccatcga
cgcttcgcgctcatcaatggcccggattatctggcgttttccgtcaggcgccggaaaggc
gtcgcgcgggcgctcgccgagcttgggcttagcctgcgcgaggaatgcgtcacgcatgcg
cagatgaccgacgaacacggttttcgcgcaatgcaggctttcctgcggcttgaggcaccg
ccgacggcggtgctctgttccagcacggttcttgcgctcggcgccgtcagggcgatcaac
caggcggggctgaagatcggcgcggatatttccctgatcgcccatgacgacgtgctgccg
atgctgaaaccggaaaatttcatggtgccgctgacgacgacgcgctcatcgctgcgcgcc
gccggccagcgcatcgcccgccggctgatcgcccagatcctccagctggaaacgctgccc
cagcaggaactctggaaggccgatctcatcgtgcgcgcctcgacgggcgccgcgccgccc
gatagatga
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