Shinella oryzae: K6301_01750
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Entry
K6301_01750 CDS
T08112
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
soj
Shinella oryzae
Pathway
soj00030
Pentose phosphate pathway
soj01100
Metabolic pathways
soj01120
Microbial metabolism in diverse environments
soj01200
Carbon metabolism
Module
soj_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
K6301_01750 (edd)
Enzymes [BR:
soj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
K6301_01750 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
UPA24969
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Position
complement(348668..350488)
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AA seq
606 aa
AA seq
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MSADKRIEAITARIVERSKPHREAYLGRVRAAAASGVHRSVLSCGNLAHGFAVCSPAEKD
ALAGDRVPNLGIITSYNDMLSAHQPFETYPALIREAAREAGGVAQVAGGVPAMCDGVTQG
QPGMELSLFSRDLIAMAAGVGLSHNMFDSVVYLGVCDKIVPGLTIAALTFGHLPAVFIPA
GPMTSGLPNDEKARVRQLFAEGKAGRAELLEAESKSYHGPGTCTFYGTANSNQMLMEIMG
FHMPGASFINPGTPLRDALTKEAAKRALAITAQGNEFTPAGEMIDERSIVNGVVGLHATG
GSTNHTLHLLAMARAAGILLTWEDISDLSDVVPLLARVYPNGLADVNHFHAAGGMGFLIQ
ELLKHGLLHDDVRTVYGQGLNAYTVDARLGANGTVLREPSPKVSHDPKVLASIETPFQPT
GGLKMLTGNIGNAVIKISAVKPERHVIEAPAKVFHDQLELNAAFKAGELTGDFIAVVRFQ
GPKANGMPELHKLTTVLGILQDRGQRVALLTDGRMSGASGKVPAAIHVTPEAVDNGPIGR
IRDGDIIRLDATHGTIEVLVDAAEFAARPQAAADLSGNEFGMGRELFAPFRAIAGPADHG
ASVLFA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgacaagcgcattgaagccattaccgcccgcatcgtcgaacgctcgaagccg
caccgcgaagcctacctcggccgcgtgcgggctgccgctgccagcggcgtgcaccggtcc
gtgctctcctgcggcaacctcgcccacggctttgcggtctgttcccccgccgagaaggac
gcgctcgccggcgatcgcgttccgaacctcggcatcatcacctcctataacgatatgctc
tcggcgcaccagccgttcgagacctacccggcgctgatccgcgaggccgcacgcgaagca
ggcggcgttgcccaggtggcaggcggcgtgccggcgatgtgcgacggcgtcacccagggc
cagccggggatggagctctcgctgttctcgcgtgacctcatcgccatggcggccggcgtg
ggcctgtcgcacaacatgttcgattcggtcgtgtatctcggcgtgtgcgataagatcgtg
ccgggcctcacgatcgccgcgctgaccttcggccacctgcccgctgtcttcattcccgcc
gggcccatgacctccggccttccgaacgacgagaaggcgcgtgtgcgacagcttttcgcc
gagggcaaggccggccgtgcggagctgctggaggccgaatccaagtcctatcacggccct
ggcacctgcaccttctacggtacggccaactccaaccagatgttgatggagatcatgggc
ttccacatgccgggcgcctccttcatcaatccgggcacgccgctgcgcgatgccctgacg
aaggaagccgccaagcgggcgctcgccattaccgcccaaggcaacgaattcacgccggcg
ggcgagatgatcgacgagcgctccatcgtcaacggcgttgtcgggctgcatgccacgggc
ggttcgaccaaccatacgctgcacctcctcgccatggcgcgcgccgccggcatcctcctg
acctgggaagatatttccgacctgtcggatgtcgtgccgctgcttgcccgcgtctatccg
aacggccttgccgacgtgaaccatttccacgccgcaggcggcatgggtttcctgatccag
gaactcctgaagcacggcctgctgcatgacgacgtgcgcaccgtctacggccaggggctc
aacgcctatacggtcgatgcccggctcggcgccaacggcaccgttctgcgcgagccctct
ccgaaggtcagccacgacccgaaggtgcttgccagtatcgagacacccttccagcccact
ggcggcctgaagatgctcaccggcaatatcggcaatgccgtcatcaagatctccgccgtg
aagcccgagcgccatgtcatcgaggcgcccgccaaggtcttccatgaccagcttgagctg
aacgcagccttcaaggccggcgaactcacgggcgatttcatcgccgtcgtgcgcttccag
ggcccgaaggccaacggcatgccggaactgcacaagctgacgacggtgctcggcatcctg
caggaccgcggccagcgcgtggcgcttctgaccgacggacgcatgtccggcgcatccggc
aaggtgccggccgccatccatgtgacgcccgaggccgtggacaacggcccgatcggccgc
atccgcgacggcgacatcatccgcctcgatgcgacccacggcacgatcgaggtcctggtg
gatgccgccgaattcgccgcccgcccgcaggcggcggccgatctttccggcaacgaattc
ggcatgggtcgcgaactcttcgcccccttccgcgcgattgccggcccggcggaccatgga
gcgagcgtgctgttcgcttaa
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