Shinella oryzae: K6301_02325
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Entry
K6301_02325 CDS
T08112
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
soj
Shinella oryzae
Pathway
soj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K6301_02325 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soj01007
]
K6301_02325 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soj03016
]
K6301_02325 (hisS)
Enzymes [BR:
soj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
K6301_02325 (hisS)
Amino acid related enzymes [BR:
soj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K6301_02325 (hisS)
Transfer RNA biogenesis [BR:
soj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
K6301_02325 (hisS)
Prokaryotic type
K6301_02325 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Molydop_binding
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
UPA25070
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All DBs
Position
474458..476053
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AA seq
531 aa
AA seq
DB search
MSEKQKKPQKLKARLPRGFVDREAADIRAVNEMTAKIRAVYERYGFDPVETPLFEYTDAL
GKFLPDSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFR
NEKPGPGRFRQFMQFDADTVGAAGVQADAEMCMMMADTMEALGIKRGDYVIRVNNRKVLD
GVLEAIGLGGDDKAGARLTVLRAIDKLDKFGSDGVAELLGKGRKDESGDFTKGAGLDEMS
IYRILHFVGAGAVLATPDTPEPDVRNPQLRRETLDMHQDMAAAVKRISYIVDETEAGAQG
VAELGQMAALFEAAGYNDGRIRIDPSCVRGLEYYTGPVFEAELQFAVTNEKGEKVVFGSV
GGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLGKLGQDDVVAPVLVTVMDGDVES
MGRYQRFTQDLRNAGIRAEMYQGNWKKFGNQLKYADRRNAPVAIIQGGDERAEGVVQIKD
LIEGKRLSGEIEDNTSWREARVAQVSVPEAELVAKVREILEAQAEDRARAG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagcagaagaaaccgcagaagctgaaagcccgcctgccgcgcggctttgtc
gaccgcgaggctgcggatatccgcgccgtcaacgagatgaccgcaaagattcgcgcggtc
tatgagcgctacggcttcgatcccgttgaaacgccgctcttcgaatataccgatgcgctc
ggcaagttcctgcccgacagcgaccgccccaacgaaggcgtcttctcgctgcaggacgac
gacgagcagtggatgagcctgcgctacgacctgacggcgccgcttgcccgccatgtcgcg
gagaatttcaacgagatccagctgccctaccgcacctaccgcgcgggctatgtcttccgc
aacgagaagcccggcccgggccgcttccgccagttcatgcagttcgatgccgacacggtc
ggtgccgccggtgtccaggcggatgccgagatgtgcatgatgatggccgacacgatggaa
gccctcggcatcaagcgtggcgactatgtcattcgcgtcaacaaccgcaaggttctggac
ggcgtgctggaagccatcggcctcggcggcgatgacaaggcaggcgcacgcctgaccgtg
ctgcgcgccatcgacaagctcgacaagttcggctctgacggcgtggcagagttgctcggc
aagggtcgcaaggatgagtccggcgatttcacgaagggcgcgggactggatgagatgtcc
atataccgcattcttcactttgtcggtgccggcgccgtattggcgacgccggacacgcct
gagcccgatgtgaggaacccccagctgcgccgggaaaccctggacatgcaccaggacatg
gccgccgccgtaaaaaggatatcctatatcgtcgatgagacggaggcgggtgcgcagggc
gtggccgaacttgggcagatggctgctctgttcgaggcggccggctacaatgacggacgg
atacggatcgacccgtcctgcgtacgcggcctcgaatattacaccggccccgtcttcgag
gccgagctgcagtttgccgtcaccaacgagaagggcgagaaggtcgtcttcgggtccgtc
ggcggcgggggccgttatgatggtctcgtgtcgcgcttcatgggccagccggtcccggcc
acgggcttctccatcggcgtctcgcgcctgatgacggcgctgaagaacctcggcaagctc
ggccaggatgatgtcgttgcccccgttctcgtcaccgtgatggatggcgatgtcgagagc
atgggccgttaccagcgcttcacccaggacctgcgcaatgccggcattcgcgccgaaatg
taccagggcaactggaagaagttcggcaaccagctgaaatatgccgaccgccgcaacgct
cccgtcgccatcatccagggcggtgacgagcgcgccgaaggcgtggtgcagatcaaggac
ctgatcgagggcaagcgcctctccggcgaaatcgaagacaacacgtcctggcgcgaggca
cgcgtggcccaggtgtccgtgccggaggccgagctggtggcaaaggtccgcgaaatcctc
gaggcgcaggccgaagaccgggcgcgggccggctga
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