Shinella oryzae: K6301_02670
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Entry
K6301_02670 CDS
T08112
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soj03009
]
K6301_02670
Enzymes [BR:
soj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
K6301_02670
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
K6301_02670
Ribosome biogenesis [BR:
soj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K6301_02670
23S rRNA modification factors
K6301_02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
S4_2
SYY_C-terminal
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UPA25136
LinkDB
All DBs
Position
complement(547569..548321)
Genome browser
AA seq
250 aa
AA seq
DB search
MSEPTETIRLDQLLLNAGLVPSRSRARDSIARGTVTVNGRVVTKPSSCFPASAVIAIDDP
AQDYVSRAALKLTAALDHFRLDPAGLDCLDIGASTGGFTQVLLERGAAHVVAIDVGHDQM
HPKLRADARVTNLEGLNARALTRDDIDDRPVGCIVSDVSFISLKLALPPALSFAETGAFC
VLLVKPQFEAGREAISKAGLLKDPDSAPAVAAELERWLVEDMGWKSLGLIPSPIAGGDGN
VEFLLGGVKP
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaccgaaaccatccgcctcgaccagctcctgctgaatgccggcctcgtg
cccagccgctcgcgggcgcgcgattccatcgcgcgcggcaccgtgaccgtcaatggccgc
gtcgtcaccaagccgagttcctgctttcccgcttccgccgtcatcgccatcgacgacccc
gcgcaggactacgtgtcgcgcgccgcgctgaagctgacggcagcgctcgaccatttccgc
ctcgatcccgcaggcctcgactgtctcgatatcggcgcctccaccggcggcttcacgcag
gtgctgctggagcgcggtgccgcccatgtcgtcgccatcgatgtcggccacgaccagatg
cacccgaagctgcgcgccgacgcgcgtgtcaccaatcttgaaggcctcaatgcgcgggcg
ctcacccgcgatgacattgacgaccggccggtcggctgcatcgtctccgacgtgtccttc
atctcgctgaagctcgcattgccaccggcactctccttcgctgagaccggcgctttctgc
gtgcttctcgtcaagccgcagttcgaggcgggccgcgaggcgatcagcaaggcggggctt
ctgaaagaccccgacagcgcgcccgcggtcgctgccgaactggaacgctggctggtggag
gacatgggctggaagagcctcggcctcatcccctcgccgattgccggcggcgacggcaat
gtcgaattcctgctgggaggcgtgaagccatga
DBGET
integrated database retrieval system
