KEGG   Shinella oryzae: K6301_03170
Entry
K6301_03170       CDS       T08112                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
soj  Shinella oryzae
Pathway
soj00230  Purine metabolism
soj00240  Pyrimidine metabolism
soj01100  Metabolic pathways
soj01232  Nucleotide metabolism
Module
soj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
soj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:soj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    K6301_03170 (nrdE)
   00240 Pyrimidine metabolism
    K6301_03170 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soj03400]
    K6301_03170 (nrdE)
Enzymes [BR:soj01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     K6301_03170 (nrdE)
DNA repair and recombination proteins [BR:soj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    K6301_03170 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: UPA25224
LinkDB
Position
649884..652040
AA seq 718 aa
MDTMTIDKPAKVPEITALDYHALNAMLNLYDEEGKIQLDKDRQAAKQYFLQHVNQNTVFF
HNLREKLDYLVTEGYYEQEVLDQYSFNFVRDLFDHAYDRKFRFPTFLGAFKYYTSYTLKT
FDGKRYLERYEDRVCMVALALARGNEQLARDLVDEIISGRFQPATPTFLNAGKKQRGELV
SCFLLRIEDNMESIGRAINSALQLSKRGGGVALSLTNLREMGAPIKQIENQSSGVIPVMK
LLEDSFSYANQLGARQGAGAVYLNAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDIT
FELAKNNEDMYLFSPHDVERVYGVAFSEISVTEKYREMVEDSRIRKKKIKARDFFQIIAE
IQFESGYPYIMFEDTVNRANPIAGRISMSNLCSEILQVSEPSAFNADLSYAKMGKDISCN
LGSLNIAAAMDSPDFGRTIETSIRALTAVSEMSHISSVPSVEKGNDDSHAIGLGQMNLHG
YLARERIFYGSEEGVDFTNIYFYTVTYHALRASNRLAVEKGVSFKGFENSKYASGEYFDK
YTGQEWLPATEQVRGIFEEAGIHIPTQQDWQELKSAVMDGGLYNQNLQAVPPTGSISYIN
HSTSSIHPIVSKIEIRKEGKIGRVYYPAAFMTNDNLDYYQDAYEIGPEKIIDTYAAATQH
VDQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTIYYIRLRQMALSGTEVQGCVSCAL
NT seq 2157 nt   +upstreamnt  +downstreamnt
ttggacacgatgacgatagacaagccggcaaaggtgccggaaatcacggcgctggattat
cacgcgctcaacgccatgctgaacctctacgacgaagagggtaagatccagctcgacaag
gaccggcaggcggccaagcaatatttcctccagcacgtcaaccagaacacggtgttcttc
cataacctgcgggagaagctcgattatctggtgacggagggctattacgagcaggaggtg
ctcgaccagtattccttcaatttcgtgcgcgacctcttcgaccacgcctatgacaggaag
ttccgcttcccgactttcctgggggccttcaagtactacacctcctacacgctgaagacc
ttcgacggaaaacggtacctggagcgctacgaggaccgcgtctgcatggtggcgctggcg
ctggcccgcggcaacgagcagcttgcccgcgatctcgtcgacgagatcatctccggccgc
ttccagccggcgacgccgaccttcctcaatgccggcaagaagcagcgcggcgagctcgtc
tcgtgcttcctgctgcgcatcgaggacaacatggaaagcatcggccgcgcgatcaactcg
gcgctccagctttccaagcgcggcggcggggtggcgctgtcgctcaccaaccttcgcgag
atgggcgcgccgatcaagcagatcgagaaccagtcctccggcgtcatcccggtcatgaag
ctgctggaggatagtttctcctacgccaaccaactcggcgcgcggcagggggcgggcgcc
gtttatctcaacgctcatcaccccgatatcatgcgcttcctcgataccaagcgcgagaat
gcggatgagaagatccgcatcaagaccctgtcgctcggcgtcgtcattcccgacatcacc
ttcgagctggcgaagaacaacgaggacatgtacctgttctcgccgcatgacgtggaacgc
gtctacggcgtcgccttctccgagatttctgtcaccgaaaaataccgcgagatggtcgag
gacagccgcatcaggaagaagaagatcaaggcgcgcgatttcttccagatcatcgccgag
atccagttcgaaagcggctatccctacatcatgttcgaggacacggtgaaccgcgcgaac
ccgatcgcgggccgcatctccatgagcaatctctgctcggaaatcctgcaggtcagcgaa
ccgagcgcgttcaacgccgatctttcctatgcgaagatgggcaaggatatctcctgcaat
ctcggctcgctcaacatcgcggccgcgatggattcgccggatttcggacggaccatcgag
acgtctatccgtgcgctcacggccgtttctgagatgagccacatctcctccgtcccctcc
gtggagaagggcaacgacgacagccacgccatcgggctcggccagatgaacctgcacggc
tatcttgcccgcgagcgcatcttctacggttcggaggaaggcgtcgatttcaccaatatc
tatttctacacggtgacgtatcacgctctgcgcgcctcgaaccggctggccgtcgagaaa
ggcgtgagcttcaagggcttcgagaattccaaatatgcctcgggcgaatattttgacaaa
tacaccgggcaggaatggctgccggcgacggagcaggtgcgcggcatcttcgaagaagcc
ggtatacacatcccgacgcagcaggactggcaggaactgaagtcggctgtcatggacggc
gggctctacaaccagaacctccaggccgtgccgccgaccggctcgatctcttacatcaac
cactcgacctcctcgatccacccgatcgtctcgaagatcgagatccgcaaggaaggcaag
atcggccgcgtctactatcccgccgccttcatgaccaacgacaacctcgattactaccag
gacgcctatgagatcggcccggagaaaatcatcgacacctatgcggcggccacccagcat
gtcgatcagggcctgtcgctgacgctgttcttccgcgacaccgcgacgacacgcgacatc
aaccgggcgcagatctacgcctggaagaagggcatcaagaccatctactacatccgcctt
cgccagatggcgctgtcaggcacggaagtgcagggctgtgtctcgtgtgcgctttga

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