Shinella oryzae: K6301_03785
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Entry
K6301_03785 CDS
T08112
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
soj
Shinella oryzae
Pathway
soj00550
Peptidoglycan biosynthesis
soj01100
Metabolic pathways
soj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K6301_03785
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6301_03785
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
soj01003
]
K6301_03785
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soj01011
]
K6301_03785
Enzymes [BR:
soj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
K6301_03785
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K6301_03785
Glycosyltransferases [BR:
soj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
K6301_03785
Peptidoglycan biosynthesis and degradation proteins [BR:
soj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
K6301_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UPA25336
LinkDB
All DBs
Position
complement(770979..773162)
Genome browser
AA seq
727 aa
AA seq
DB search
MEDDSPTPERPRRRKRHFLLRLDSWIDSTVWNAGFRLGEIWEEITIFFRRFHVRGWRKAV
FELAGEGMNLGTAGFVLLLALALPAFEETKGNWRAQSDFAVTFLDRYGNEIGHRGIIHED
SVPIDELPDHLIKAVLATEDRRFFSHFGIDFLGLARALNENARAGGVVQGGSTLTQQLAK
NLFLTNERTLERKIKEAFLSLWLEANLSKKEILRLYLDRAYMGGGTFGAAAAAQFYFGKN
ITDVNLAESAMLAGLFKAPARYAPHVNLPAARGRANEVLTNLVQGGLMTEGQVIAARRNP
ATVIDRKDKTAPDFFLDWAFDEVQRIAKPFAQHSLVVRTTIDMGLQAAAEEAVESGLRQY
GDSYRVKQGALVMVENGGAVRAMVGGRDYGESQFNRATRALRQPGSSFKAYTYAAAMEAG
MTPETTIVDGPISWGGWSPQNYGRSYAGRVTLMTAMAKSINTVPVRLAKDKLGTKRIAAL
AKEMGVETPLRTDKTMPLGTTEVTVLDQATAYAVFPAGGKKARRHGISQIINYDGDILYD
FARDEPPARQILSDQATSSMNRIFVTIPVSGTARRGALDRGIVSGGKTGTTQAYRDAWYV
GFTGNYTTAVWFGNDDYTSTNNMTGGSLPAMTFKRLMDYAHQGIELRPIPGIENPLPDGK
QATEVAQTNPDESALPALVRPRSLSTDVTKLLKDVARQFEEAKPLKPDGRVAALDDALDL
PRANRTE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacgacagcccgaccccagaacgaccccgccgccgcaagcggcatttcctgctg
cggctggattcgtggatcgattccacggtctggaacgctgggttccgcctgggcgagatc
tgggaggagatcaccatcttcttccgccgcttccatgtgcgcggctggaggaaggcggtt
ttcgagctggccggcgaaggcatgaacctgggcacggcgggcttcgtgctgctgctcgcg
ctcgcccttcccgccttcgaggaaaccaagggcaactggcgcgcccagagcgatttcgct
gtcaccttccttgatcgctacggcaacgagatcggccatcgcggcatcatccacgaggat
tcggtgccgatcgacgagctgcccgaccacctcatcaaggccgtcctcgcgacggaggac
cgccgctttttcagccatttcggcatcgatttcctcggccttgcccgcgcgctgaacgag
aatgcgcgcgccggcggcgtcgtgcagggcggctccaccctcacccagcagctggcgaag
aacctcttcctcaccaacgagcgcacgctggagcgcaagatcaaggaagccttcctgtcg
ctctggctggaggccaatctctccaagaaggaaatcctgcggctttatctcgaccgcgcc
tatatgggcggcggcaccttcggcgcggcggcggcggcgcagttctacttcggcaagaac
atcacggatgtgaaccttgccgaatccgccatgctggcgggcctgttcaaggcgccggcg
cgctatgcgccgcatgtcaacctgccggcggcgcgcggccgcgccaacgaggtgctgacc
aacctcgttcagggcgggctgatgaccgagggccaggtgatcgccgcgcggcgcaatccc
gccaccgtcatcgaccgcaaggacaagacggcgccggatttcttcctcgactgggccttc
gacgaggtccagcgcatcgccaagcccttcgcccagcattcgctggtcgtgcgcaccacc
atcgacatgggcctgcaggccgccgccgaagaggcggtggaaagcggccttcgccaatat
ggcgacagctaccgcgtcaagcagggcgcgctggtcatggtggagaacggcggggccgtg
cgcgccatggtcggcgggcgcgattacggcgaaagccagttcaaccgcgccacgcgcgcg
ctgcgccagccgggttcgtccttcaaggcctatacctatgcggccgccatggaagccggc
atgacgcccgagacgaccatcgtcgatgggccgatcagctggggcggctggtcgccgcag
aattacggccgcagctatgccggccgcgtcacgctgatgacggcgatggcgaaatcgatc
aacaccgtgcccgtccgcctcgccaaggacaagctcggcaccaagcgcatcgccgcgctc
gccaaggaaatgggcgtcgaaacgccgctgcgcaccgacaagaccatgccgctcggcacc
accgaggtcacggtgctcgaccaggcgacggcctatgccgtcttcccggccggcggcaaa
aaggcgcgccgccacggcatcagccagatcatcaattacgacggcgatatcctctacgat
ttcgcccgcgacgagccgcccgcccggcagatcctctccgaccaggcgacgtcctcgatg
aaccgcatcttcgtcaccattcccgtcagcggcaccgcacggcgcggcgcgctcgaccgc
ggcatcgtgtcgggcggcaagacgggcaccacgcaagcctatcgcgacgcctggtatgtc
ggcttcaccggcaactacacgactgcggtctggttcggaaacgacgactacacctcgacc
aacaacatgaccggcggctccctgcccgccatgaccttcaagcgcctgatggattacgcc
caccagggtatcgagcttcgtcccattcccggcatcgaaaacccgcttccggatggcaag
caggccacggaggtcgcgcagaccaatcccgatgagagcgccctgcccgccctcgtgcgc
ccgcgctcgctgtccacggatgtcacgaaactcctcaaggacgtcgcccgccagttcgaa
gaggccaagcccctcaagccggatggccgcgtggccgcgctggacgatgcgcttgacctg
cctagagcgaaccggacagagtaa
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