KEGG   Shinella oryzae: K6301_04045
Entry
K6301_04045       CDS       T08112                                 
Name
(GenBank) heme lyase CcmF/NrfE family subunit
  KO
K02198  cytochrome c-type biogenesis protein CcmF
Organism
soj  Shinella oryzae
Brite
KEGG Orthology (KO) [BR:soj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:soj02000]
    K6301_04045
Transporters [BR:soj02000]
 Other transporters
  Others
   K6301_04045
SSDB
Motif
Pfam: CcmF_C Cytochrom_C_asm
Other DBs
NCBI-ProteinID: UPA25383
LinkDB
Position
816636..818621
AA seq 661 aa
MIIELGHYALILALATVIIQAVLPLIGTIRNDRALMAVAPAAAFAGFLLVLFSFSVLTFA
YVVSDFSVANVWENSHSLKPMIYKISGVWGNHEGSMLLWLLILVFFSALVASFGANLPER
LRANVLAVQGLISTAFALFILLTSNPFIRLSPAPAEGQDLNPVLQDIGLAIHPPLLYLGY
VGFSVCFSFAIAALIDGRIDAAWARWVRPWALTAWSFLTAGIAMGSYWAYYELGWGGWWF
WDPVENASFIPWLAGTALLHSALVMEKREALKIWTVLLAILTFSMSLLGTFLVRSGVLTS
VHAFATDPTRGVFILAILVFFIGGALSLFAFRAATLKAGGLFAPISREGSLVLNNLILTT
AAATVLTGTLYPLVLEALTGEKISVGPPFFNLTFGLLMLPLLLAVPFGPLLAWKRGDILA
AGQRLFAAAAIGLVVAAAVMYAHSGGPVLAYFGIAIGFYMIAGAVTDLWLRAGIGKVAGN
VAFRRFVGLPGSAFGTALAHIGIGVTVIGIVAVTAFETEHVVEMKPGMQVEAGGFTLTFD
GMRRGQGPNYSEESGHFTVARGGTTVTDIWSSKRFYTARRMPTTEAGIRTFWFSQLYVSL
GDAMADGGIVVRVWWKPMILCIWIGTLIMMAGGAVSLFDRRLRVGAPQKARKVKPALEAA
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgatcatcgagctcggccattatgctctcatcctggcgctggcgaccgtcatcatccag
gcggtactgccgctcatcggcacgatccgcaacgaccgcgcgttgatggccgtggcgccg
gccgcagcctttgccggtttcctgctcgtgctgttttccttttcggtgctgaccttcgcc
tatgtcgtgtcggatttctccgtcgcgaatgtctgggagaactcgcattcgctgaagccg
atgatctacaagatctccggtgtgtggggaaaccatgagggctcgatgctgctctggctc
cttatcctggtcttcttcagtgcgctggtcgcaagcttcggcgccaacctgcccgagcgg
ctgcgggccaatgtgctggccgtgcagggcctgatctcgacggcctttgcactcttcatc
ctcctgacgtcgaaccctttcatccgcttgtcgccggcgcccgccgaggggcaggacctc
aacccggtcctgcaggacatcggcctcgccatccacccgccgctgctctatctcggctat
gtcggcttttccgtctgtttctcgtttgcgatcgccgcgctgatcgacggccgcatcgat
gcggcctgggcgcgctgggtgcgcccctgggcgctcaccgcctggtcgttcctgaccgcc
ggcatcgccatgggctcctactgggcctattacgaattgggctggggcggctggtggttc
tgggatccggtggagaacgcctcgttcattccctggctcgccggcaccgcgttgctgcat
tcggcgctcgtcatggaaaagcgcgaggcgctgaagatctggaccgtgctgctcgccatc
ctcaccttctccatgtcgctgctcggcaccttcctcgtgcgctcgggcgtgctgacctcg
gtgcacgcattcgcgaccgacccgacgcgcggcgtcttcatcctggcgatcctcgtcttc
ttcatcggcggcgcgttgtcgctctttgccttccgcgcggcgaccctgaaggccggcggc
ctgttcgcgccgatctcgcgcgaaggctcgctcgtcctcaacaacctgatcctcaccacg
gccgccgcgacggtgctgaccggcacgctctatccgctcgtgctggaggcgctgaccggc
gagaagatttccgtcggaccgccgttcttcaacctgaccttcggcctgctgatgctgccg
ctcctgctggcggtgccgttcgggccgctgctggcctggaagcgtggcgatatccttgcg
gcgggacagcggctgtttgcggctgccgcgatcggcctcgtggtggccgcggcggtgatg
tacgcccacagcggcgggccggtgctggcctatttcggcatcgccatcggcttttacatg
atcgccggcgcggtcacggatctgtggctgcgcgccggtatcggcaaagtggccggcaat
gtcgcgttccggcgcttcgtcggcctgccgggctcggcgttcggcacggcgctcgcgcat
atcggcatcggtgtcacggtcatcggcatcgtggccgtcacggccttcgagaccgagcat
gtcgtggaaatgaagccgggcatgcaggtcgaggcgggcggcttcacgctgaccttcgac
ggcatgcgccgtgggcaggggccgaactattccgaggaatccgggcacttcaccgtggcc
cgcggcggcacgaccgtcaccgacatctggtcgtcgaagcgattctacacggcgcgccgc
atgcccacgacggaggcgggtatccgtacgttctggttcagccagctctatgtttcgctc
ggcgacgcgatggcggacggcggcatcgtcgtgcgggtgtggtggaagccgatgatcctg
tgcatctggatcggcacgctcatcatgatggcgggcggcgcggtctcgctgttcgaccgg
cgcctgcgcgtcggcgcgccgcaaaaggcccgcaaggtaaagccggctctggaggcggcc
gaatga

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