Shinella oryzae: K6301_04055
Help
Entry
K6301_04055 CDS
T08112
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
soj
Shinella oryzae
Pathway
soj01503
Cationic antimicrobial peptide (CAMP) resistance
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_04055
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_04055
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soj01002
]
K6301_04055
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
soj03110
]
K6301_04055
Enzymes [BR:
soj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
K6301_04055
Peptidases and inhibitors [BR:
soj01002
]
Serine peptidases
Family S1: chymotrypsin family
K6301_04055
Chaperones and folding catalysts [BR:
soj03110
]
Other chaperones and cochaperones
DegP / HtrA
K6301_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
DUF3394
Tricorn_PDZ
PDZ_1
Peptidase_S46
DUF6288
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
UPA25385
LinkDB
All DBs
Position
819199..820764
Genome browser
AA seq
521 aa
AA seq
DB search
MAKISAFRPSLKAALQTTTVAGLAAVMLATGIPARVTESYAEAVSVQAPQVASFADVVQA
VSPAVVSVRVESDAKPANDESNFSFNFGGRGFDELPDDHPLKRFFREFGGQDQFRGDRGP
DRRFGDRRGPGRKPHLRPTAQGSGFFISEDGYIVTNNHVVSDGSAFTVVMNDGTELKATL
VGKDSRTDLAVLKVDEKDKRKFTYVSFADDSQIRVGDWVVAVGNPFGLGGTVTAGIISAR
GRDIGSGPYDDYLQVDAAVNRGNSGGPTFNLNGQVVGINTAIFSPSGGNVGIAFAIPASV
AKGVVANLMKDGKVDRGWLGVQIQPVSRDIADSLGLADAAGALVVEPQADSPGAKAGIKK
GDVITALEGEPVKDPRDLARRVADIAPGKTVDVAIWRDGKSQTIKVEIGTLAGEAIEAAT
TTDDAAPAEESSEQALADLGISVTPGNDGLTVSSVDPDSDASDRGLKEGDRITSVNNQTV
KSADEVMKVIEAARKDGRSKALFQVETKDGSRFLALPIDQG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatttccgcgttccgtccgagcctcaaggccgcgttgcagacgaccaccgtc
gcagggcttgctgccgtcatgctcgcgaccggcatccccgcgcgcgttaccgaaagctat
gcagaagccgtttccgtccaggcgccgcaggttgcgagcttcgccgacgtcgttcaggcc
gtttccccggccgtggtttccgtccgtgtcgaatccgatgccaagccggccaatgacgag
agcaatttctcgttcaacttcggcggccggggctttgacgagctgcccgacgatcacccg
ctgaagcgcttcttccgtgaattcggcggccaggaccagttccgcggcgaccgcggaccg
gaccgtcgcttcggtgaccgccgtggcccgggccgcaagccgcatcttcgcccgaccgca
cagggctccggcttcttcatctccgaagacggctatatcgtcaccaacaaccacgtcgtc
agcgatggctcggccttcacggtcgtcatgaacgacggcaccgagctgaaggccacgctc
gtcggcaaggacagccgcaccgacctcgccgtgctgaaggtcgatgagaaggacaagcgc
aagttcacctatgtcagcttcgccgacgacagccagatccgcgtcggagactgggtcgtg
gcggtcggcaacccgtttggcctcggcggtacggtgacggcgggcatcatttccgcccgc
ggccgtgacatcggttccggaccctatgacgactacctccaggtggatgccgccgtgaac
cgcggcaactcgggtggcccgaccttcaacctcaacggccaggtcgtgggcatcaacacc
gccatcttctcgccgtcgggcggcaatgtcggcatcgcgtttgcgattcccgcgtcggtc
gccaagggcgtcgtcgccaacctgatgaaggacggcaaggtcgaccgtggctggctcggc
gtgcagatccagccggtcagccgcgatatcgccgattcgctcggcctggcggatgcagcc
ggtgccctcgtcgtcgagccgcaggccgactcgcccggtgccaaggccggcatcaaaaaa
ggtgacgtgatcaccgcgcttgaaggcgaaccggtcaaggatccgcgtgacctcgcccgc
cgcgtcgccgatatcgcacccggcaagacggttgatgtcgccatctggcgcgatggcaag
tcgcagacgatcaaggtcgagatcggcacgctggccggcgaagccatcgaggcggccacg
accacggatgacgctgctcccgcagaggagtccagtgaacaggcgctcgccgatctcggc
atctccgtcacccccggcaatgacggcctgaccgtctcctcggtcgatccggactccgac
gccagcgatcgcggcctcaaggaaggcgaccgcatcacctccgtcaacaaccagacggtc
aagtccgcggacgaggtgatgaaggtgatcgaggccgcccgcaaggacggccgctccaag
gcgctgttccaggtcgagaccaaggacggtagccgcttcctggcgcttcccatcgaccag
ggctga
DBGET
integrated database retrieval system
