Shinella oryzae: K6301_04075
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Entry
K6301_04075 CDS
T08112
Name
(GenBank) PAS-domain containing protein
KO
K07716
two-component system, cell cycle sensor histidine kinase PleC [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_04075
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_04075
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_04075
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_04075
Protein kinases [BR:
soj01001
]
Histidine kinases
Cell cycle family [OT]
K6301_04075
Two-component system [BR:
soj02022
]
Cell cycle family
PleC-PleD (cell fate control)
K6301_04075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_3
PAS_7
PAS
HATPase_c_2
PAS_4
PAS_8
PAS_9
GRIP
HATPase_c_3
DUF389
Motif
Other DBs
NCBI-ProteinID:
UPA25389
LinkDB
All DBs
Position
complement(825989..828346)
Genome browser
AA seq
785 aa
AA seq
DB search
MKTMADAQRGRAAGGWTRLKFPGMAAWKCEATGPAKIFAGPTARRLSRAEPVLKRSIPIL
IIAFLLVVAISRVVGILVEHDRMETSVRDTTSLTALAVGAAFSGKMAQSLAEADRMAVEA
TLSVNLPQDRMQPGGIVLFVAENGRVFGSSLAASRYVGQSLARFSPELAAIQYFGDPATV
FRTRIAGDDYYASLVEMPRKGGFIVVANPLGQTALFWRDEIALNVTLFTGISAILLVILY
AYYIQAKRARDADAIFAESNLRVETALARGRCGLWDFDLENRRLFWSSSMYEMLGMPARD
SVLSFGDAARLMHPDDDGIYQVARAVARGEAKQVDQVFRMRHADGHYVWMRARAQLIRMS
SGRMHMIGIAMDVTEQHRLAQRYQEADERLADAIECTSEAFVLWDKNDRLVMCNAHYQQA
YGLPDEVLVPGTERAVVNAAAARPVIERRIADSDGAGVSQTTEVQLADERWLQINERRTR
DGGRVSVGTDITMMKRHQVRLRESERRLMATIGDLSASRAKLERQKAELSLANANYQAEK
ERAEAANRAKSEFLANMSHELRTPLNAILGFSEILQNQMFGPIGSDKYREYSRDIHESGK
HLLNVISDILDMSKIEAGHMRISCEAVDLAPLIEETLRLTMLQAEKKNITVEQACPGNLV
TVADRRAMKQILLNLLSNAMKFTNEGGKVEVRARRVNGAVTLTIADTGIGIPKSALQKIG
QPFEQVQSQYAKSKGGSGLGLAISRSLAHLHGGAMRIRSDEGKGTIISVRIPDRERLAAL
HLAAA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttgaagactatggcggacgcgcaacgaggacgcgcagccggcgggtggactcgtctcaaa
tttccgggaatggcggcctggaaatgcgaggcgacggggccagcgaagattttcgcgggg
ccaaccgcacggcgtctgtcacgggcggagcccgtgctgaagcggtcgataccgatcctg
atcattgcattcctgcttgtcgtggcgatatcgcgggtcgtcggcattctggtcgaacat
gaccggatggaaacgagcgtgcgcgacacgacctcgctgacggcgctggccgtcggcgcc
gccttctccggcaagatggcgcaaagccttgccgaggccgaccgcatggcggtggaggcg
acgctgtccgtcaacctgccgcaggatcgcatgcagccgggcggcatcgtgctgttcgtt
gcggaaaacggccgcgtcttcggcagctcgctggcggcgtcgcgctatgtcggccagtcg
ctcgcgcgcttctcgccagagcttgccgccatccagtatttcggcgatcccgccaccgtc
ttccgcacgcgcatcgccggcgacgactattacgcctcgctcgtggaaatgccgcgcaag
ggcggcttcatcgtggtggccaatccgcttggccagaccgcgctcttctggcgcgacgag
atcgccctgaacgtgacgctcttcaccgggatctccgcgatcctgctcgtcattctctat
gcctattacatccaggcgaagcgcgcgcgcgacgccgatgccatctttgcggaatccaac
ctgcgggtggaaacggcgctggcacgcggccgctgcggcctgtgggacttcgacctggag
aaccgccggctgttctggtcgagctcgatgtacgagatgctcggcatgccggcccgcgac
agcgtattgtccttcggggatgccgcgcggctgatgcatcccgacgacgacggcatctac
caggtggcgcgcgcggttgcccgcggcgaggccaagcaggtggaccaggtcttccgcatg
cgccatgccgacggacactatgtctggatgcgcgcgcgcgcgcagctcatccgcatgtcc
tccggccgcatgcacatgatcggcatcgccatggacgttacggaacagcaccgcctcgcc
cagcgctaccaggaagccgacgagcggcttgccgacgccatcgaatgcacctcggaagcc
ttcgtgctgtgggacaagaacgaccggctcgtcatgtgcaatgcgcattaccagcaggcc
tatggcctgccggacgaggtgctggtgcccggcacggagcgcgccgtggtgaatgccgcg
gctgcccgccccgtcatcgagcggcgtatcgccgattccgacggcgccggcgtgtcgcag
accaccgaagtgcagctcgcggacgaacgctggctgcagatcaacgagcgccgcacgcgc
gacggcggacgcgtttccgtcggcaccgacatcaccatgatgaagcgccaccaggtgcgt
ctgcgcgaatccgagcgccgcctgatggcgaccatcggcgacctttcggcctcgcgcgcc
aagctggagcggcagaaggccgagctttcgctggccaacgccaactaccaggccgaaaag
gaacgcgccgaggcggcgaaccgcgccaaatcggaattccttgccaacatgtcgcatgag
ctgcgcacgccgctcaacgccatcctcggcttctcggaaatcctgcaaaaccagatgttc
ggcccgatcggctcggacaagtaccgcgaatattcccgcgatatccacgaaagcggcaag
cacctgctcaacgtcatcagcgacattctcgacatgtcgaagatcgaggccgggcacatg
cgcatcagctgcgaggcggtcgacctcgcgccgctgatcgaggagacgctgcgtctcacc
atgctgcaagccgaaaagaagaacatcacggtcgagcaggcctgcccgggcaacctcgtc
acggtggccgaccgccgcgcgatgaagcagatcctgctgaacctcttgtcaaacgccatg
aagttcaccaacgagggcggcaaggtggaagtgcgggcgcggcgggtgaacggcgccgtc
acgctgacgatcgccgacacgggcatcggcattccgaaatccgccctccagaaaatcggc
cagcccttcgagcaggtgcagagccagtatgccaagagcaagggcggttcggggctgggc
ctcgccatctcgcgctcgctcgcccacctgcacggcggcgccatgcgcatccgctccgac
gagggcaagggcacgatcatctccgtgcgcattcccgaccgcgaacggctcgccgcactg
catctcgcggcggcctga
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integrated database retrieval system
