Shinella oryzae: K6301_04370
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Entry
K6301_04370 CDS
T08112
Name
(GenBank) bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
soj
Shinella oryzae
Pathway
soj00230
Purine metabolism
soj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
K6301_04370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soj03009
]
K6301_04370
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
K6301_04370
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
K6301_04370
Ribosome biogenesis [BR:
soj03009
]
Prokaryotic type
Other maturation factors
K6301_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RelA_AH_RIS
HD_4
RelA_SpoT
TGS
ACT_4
HD
ACT_AHAS_ss
ACT
ACT_5
ThiS
Motif
Other DBs
NCBI-ProteinID:
UPA25442
LinkDB
All DBs
Position
888188..890416
Genome browser
AA seq
742 aa
AA seq
DB search
MMRQYELVERVQKYKPDANEALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMR
LDESTIAVALLHDTIEDTSATRAEIDELFGEDIGALVEGLTKIKKLDLVSKKAKQAENLR
KLLLAISDDVRVLLVKLADRLHNMRTLEHMSPEKRARISEETMDIYAPLAGRMGMQDMRE
ELEDLSFRHINPEAYETVSRKLEELSQRNEGLIRKIEEELRELLVVNGLPDALVKGRQKK
PYSVFRKMQSKSLSFEQLSDVYAFRILVGDIPACYAALGIVHTRWRVVPGRFKDYISTPK
QNDYQSIHTTIVGPSRQRIELQIRTKRMHEIAEYGIAAHSLYKDKEPVNEEAARSPRSNA
YALLRRTIEALAEGDNPEEFLEHTKLELFQDQVFTFTPKGQLITLPRGATPIDFAYAVHT
NIGDTCVGAKINGRIMPLVTRLNNGDEVEIIRSGIQVPPPAWEEIVVTGKARAAIRRATR
AAIRKQYSGLGYRILERTFDRAGKTFSRDGLKPVLHRLGQKDVEDAIASVGRGELSSLDV
LRAVFPDYQDERVTVKPSTDEGWFNMRSAAGMVFKLPGKTKAALEDGEGETGPEALPIRG
LSGNAEVHFSAGGAVPGDRIVGIMEKDKGITIYPIQSPALQKFDDEPERWIDVRWDLDEA
NNTRFMARIMINALNEPGTLAEVTQVIATSDINIRSMSMARVAADFTEVHIDLEVWDLRQ
LNQLMGQLKELQCVSTISRVFE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtcaatatgaactcgtggagcgggttcagaaatacaagcccgatgccaacgag
gcgctgctcaacaaggcctatgtctacgccatgcagaagcacggccagcagaagcgtgcg
agcggcgatccctacatctcgcatcctctcgaagtcgccgccatcctcacggatatgcgg
ctcgacgaatcgaccatcgccgtcgcccttctgcacgatacgatcgaggacaccagcgcg
acgcgcgcggaaatcgacgagctgttcggcgaggatatcggcgccctcgtcgagggcctg
accaagatcaagaagctcgacctcgtttccaagaaggccaagcaggcggaaaacctgcgc
aagctcctgctcgccatctccgacgacgtgcgcgtgctgctcgtcaagctcgccgaccgc
ctgcacaacatgcgcacgctcgagcatatgtcgccggaaaagcgcgcccgcatctccgag
gagacgatggacatctatgcgccgctcgccggccgcatgggtatgcaggatatgcgcgag
gaactggaagacctgtccttccggcatatcaacccggaagcctacgagaccgtctcgcgc
aagctggaggagctgtcgcagcgcaacgaggggctgatccgcaagatcgaggaggagctg
cgcgaactgctcgtcgtcaacggcctgccggatgccctcgtcaagggccgccagaagaag
ccctattcggtcttccgcaagatgcagtcgaagtcgctctccttcgagcaactgtccgac
gtctacgccttccgcatcctcgtcggcgacattcccgcctgctatgcggcgctcggcatc
gtgcacacgcgctggcgcgtcgtgcccggccgcttcaaggactatatctcgacgcccaag
cagaacgactaccagtcgatccacaccacgatcgtcgggccgtcgcgccagcgcatcgag
ctgcagatccgcaccaagcgcatgcacgagatcgccgaatacggtatcgccgcgcactcg
ctctacaaggacaaggagccggtcaacgaggaggccgcgcgctcaccgcgctccaatgcc
tatgccctgctgcgccggaccatcgaggcgcttgccgaaggcgataatcccgaggaattc
ctcgagcacaccaagctggaactgttccaggaccaggtgttcaccttcacgcccaagggc
cagctgatcacgctgccgcgtggcgcgacacccatcgatttcgcctatgcggtgcacacc
aatatcggcgatacctgcgtcggcgccaagatcaacggccgcatcatgccgctcgtcacc
cgtctcaacaacggcgacgaggtggagatcatccgctccggcatccaggtgccgccgccc
gcctgggaagagatcgtcgtgaccggcaaggcgcgcgcggccatccgccgcgccacgcgc
gccgccattcgcaagcaatattccggcctcggctaccgcatcctggagcgcaccttcgat
cgcgccggcaagaccttttcacgcgacggcctgaagcccgtgctgcaccggctcggccag
aaggacgtggaagacgcgatcgcctcggtgggccgcggcgaactctcttcgctcgacgtg
ctgcgcgccgtcttcccggattatcaggacgagcgcgtcaccgtgaagcccagcacggac
gagggctggttcaacatgcgcagcgccgccggcatggtcttcaagctgcccggcaagacg
aaggcggcgctggaagacggcgagggcgaaacggggccggaggccctgccgatccgcggt
ctgtccggcaatgcagaggtgcatttctccgccggcggcgccgttcccggcgaccgcatc
gtcggcatcatggagaaggacaagggcatcaccatctatccgatccagtcgccggccctg
cagaagttcgacgacgagccggagcgctggatcgacgtgcgctgggatctcgacgaggcc
aacaacacccgcttcatggcgcgcatcatgatcaacgcgctgaacgagccgggcacgctg
gccgaggtcacgcaggtcatcgccaccagcgacatcaatatccgctcgatgtccatggca
agggtcgcggccgatttcaccgaggtgcatatcgacctcgaggtctgggacctgcggcag
ctcaaccagctgatgggacagctgaaggagttgcagtgcgtttcgaccatcagccgtgtg
tttgagtag
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